Bioinformatics tools for Janis; the Pipeline creation helper
Project description
Janis - Bioinformatics
This repository contains tools and data types for Janis directly related to the bioinformatics field.
Refer to the documentation.
Data types
The data types are a way of encapsulating information about the file (including secondary files), and it allows clarity when connecting inputs and steps together (as you know a BAM file should be connected to BAM input).
Documentation
Documentation is generated on Janis. To generate new documentation you will need to:
- Commit your changes here,
- Update the submodule pointer on Janis,
- Checkout Janis (recursively),
- Run the regenerate script
janis/docs/regeneratedocumentation.py
, - Commit these changes and the documentation will autobuild on ReadTheDocs.
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Close
Hashes for janis-pipelines.bioinformatics-0.9.4.tar.gz
Algorithm | Hash digest | |
---|---|---|
SHA256 | 2bf2424fff0107cab39d1c8bb337c8030af99e21119b05694c171ee21543f777 |
|
MD5 | 580c84abcf24cee08a379dd70a3b1bba |
|
BLAKE2b-256 | 0563df1d36c4b6afe7161ef49c80b295286ea8c360381cc65764d1a8ccb09eb4 |
Close
Hashes for janis_pipelines.bioinformatics-0.9.4-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | dbd9dffb8fd37a7b2f5920a8fc7b3e47b14d3726302d956bbaa2fba094d8bfba |
|
MD5 | fab66b7ea0a6bc33fd6edceb3664bd46 |
|
BLAKE2b-256 | fbfaef5c94c1317f7efd62bd675da55142f3f9400704cc6bd07f8cdc443b0286 |