Project description

Jnotype

JAX-powered Python package for exploratory analysis of binary data. This includes genotype data, binary images, and data sets used in ecology.

Note: this package is in early development stage.

Note: The package has not reached a stable API yet. Frequent changes may appear

We recommend setting up a new virtual environment. You can install the package using PIP:

$ python -m pip install 'jnotype @ git+https://github.com/cbg-ethz/jnotype'

However, this will install the CPU version of JAX. To use GPU, you may need to follow the official JAX installation tutorial.

Directory examples/ contains Quarto notebooks, which demonstrate basic functionalities of the package.

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This version

0.1.0

Nov 3, 2024

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