An abstraction layer to run jobs on HPC clusters using Grid Engine, Torque, or locally.
Project description
An abstraction layer to run jobs on HPC clusters using Grid Engine, Torque, or locally.
The jobrunner package was developed by the United States Food and Drug Administration, Center for Food Safety and Applied Nutrition.
Free software
Documentation: https://jobrunner.readthedocs.io
Source Code: https://github.com/CFSAN-Biostatistics/jobrunner
PyPI Distribution: https://pypi.python.org/pypi/jobrunner
Features
Python API for job submission
Consistent interface to run jobs on Grid Engine, Torque, or locally
Dependencies between jobs
Array jobs and normal non-array jobs
Array job parameter substitution
Array job slot-dependency
Limit the CPU resources consumed by array jobs
Separate log files for each array job task
Citing jobrunner
To cite jobrunner, please reference the jobrunner GitHub repository:
License
See the LICENSE file included in the jobrunner distribution.
History
1.0.0 (2018-12-03)
First public release.
Project details
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