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Package for running jobs on Sun Grid Engine (SGE) / PBS / Slurm clusters.

Project description

# Job Submitter

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Package for running jobs on Sun Grid Engine (SGE) / PBS / Slurm clusters.

## Goals

- Provide an easy way to submit batch jobs from within a Jupyter notebook running on one of the nodes in the cluster.

## Example

from jobsubmitter import JobOpts, JobSubmitter

JOB_ID = 'job_0'

ENV = {
'PATH': '/home/kimlab1/strokach/anaconda/bin:/usr/local/bin:/usr/bin:/bin',

jo = jobsubmitter.JobOpts(
js = jobsubmitter.JobSubmitter('localhost')

futures = js.submit(system_commands, jo, deplay=0.1)

## Contributing

- Make sure all tests pass before merging into master.
- Follow the PEP8 / PyFlake / Flake8 / etc. guidelines.
- Add tests for new code.
- Try to document things.
- Break any / all of the above if you have a good reason.

# History

## 0.0.2 (2018-02-21)

* First release on PyPI.

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