Tools for extracting information from jpHMM (http://jphmm.gobics.de) output.
Project description
jpHMM tools
jphmm_tools provides methods for extracting information from jpHMM [Schulz et al. NAR 2012] output.
It implements tool for
- converting Los Alamos alignment file into a reference file suitable for jpHMM:
jphmm_ref -h
- aligning sequences based on the jpHMM output:
jphmm_align -h
- extracting sequence subtype information from the jpHMM output:
jphmm_subtype -h
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