Yet another Python library with helpers and utilities for data analysis and processing.
Project description
Yet another Python library with helpers and utilities for data analysis and processing.
Installation
pip install jupyter-analysis-tools
You can also install the in-development version with:
pip install git+https://github.com/BAMresearch/jupyter-analysis-tools.git@main
Documentation
Development
To run all the tests run:
tox
Note, to combine the coverage data from all the tox environments run:
Windows |
set PYTEST_ADDOPTS=--cov-append tox |
|---|---|
Other |
PYTEST_ADDOPTS=--cov-append tox |
# CHANGELOG
## v0.1.6 (2024-03-25)
### Chore
chore(CI): Update semantic-release config
no pre-releases anymore ([d1b4b86](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d1b4b862694b844db746c90e4280dd73ecbb9c7b))
### Fix
fix(notebook_utils): notebookapp import path changed ([27266db](https://github.com/BAMresearch/jupyter-analysis-tools/commit/27266db0c62a1e35be8bfb90194b001f29d4534c))
## v0.1.6-dev.5 (2023-04-20)
### Chore
chore(Packaging): switch from test.pypi.org to pypi.org ([7878db8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7878db88d36156eefa1c4db807fa3a17e82ea755))
chore(GitHub Action): Updated templates ([ff82de6](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ff82de6b3ccd06fd5bd8b3728215b901f8a74c39))
## v0.1.6-dev.4 (2023-04-20)
### Chore
chore(GitHub Action): test first, continue on success; some fixes
reapplied cookiecutter ([ac9f279](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ac9f279c68570c31d9b478f3e988e503b30549af))
## v0.1.6-dev.3 (2023-03-28)
### Chore
chore(GitHub Action): Remove old doc files first before populating with newly generated docs ([d828528](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d828528266cd219b9bc4804e2fdb9ad51842cc97))
## v0.1.6-dev.2 (2023-03-27)
### Chore
chore(GitHub Action): fix update of gh-pages ([c74f6ba](https://github.com/BAMresearch/jupyter-analysis-tools/commit/c74f6ba5c4c557cf20d236ee848f31179f75e29c))
## v0.1.6-dev.1 (2023-03-27)
### Documentation
docs(analysis): minor fix ([601a6f7](https://github.com/BAMresearch/jupyter-analysis-tools/commit/601a6f7dbbf383810add39620748808c51af6fa3))
## v0.1.5 (2023-03-27)
### Documentation
docs(cleanup): removed obsolete module doc, replaced by autosummary generated files ([c0d4256](https://github.com/BAMresearch/jupyter-analysis-tools/commit/c0d4256a5bcbb83a9a9c0ca0dd3001b9d111cb4b))
docs(format): fix formatting with black ([5de80d4](https://github.com/BAMresearch/jupyter-analysis-tools/commit/5de80d4d528bfb2bf106fa38d2cd8f30f6421f19))
### Fix
fix(reBin): module renamed to binning, fixes name clashes with docs gen ([ec959fb](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ec959fb9e1b51d69cdceaf7784b27df22aa6f4d4))
### Style
style(format): fix whitespace and quotes with black ([b0b7dba](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b0b7dbaac59528ead6c663165c8d4dab3aabcdfe))
style(binning): fix quoting by using black formatter ([61603f7](https://github.com/BAMresearch/jupyter-analysis-tools/commit/61603f7de8640437ccd277faefc2d31fa1e1e232))
## v0.1.5-dev.2 (2023-03-27)
### Chore
chore(Packaging): coveragerc removed, now in tox.ini ([01a15c1](https://github.com/BAMresearch/jupyter-analysis-tools/commit/01a15c186d661ca27f6b35d19ee6bfc03468b50e))
## v0.1.5-dev.1 (2023-03-27)
### Chore
chore(cookiecutter): changelog filename changed ([f233036](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f2330369ac49bc958067154684c0d5fe612e190a))
chore(cookiecutter): updated config & version numbering, pytest cfg, black fmt ([ffd69f6](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ffd69f65d1b3012ed3d1a0031bf498c9f4b0f911))
chore(GitHub Action): reordered to run docs and tests in parallel ([1beedd7](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1beedd7753ca3b88d510a15536c53e6049ebc4f7))
### Documentation
docs(General): config updated by cookiecutter
changelog in markdown fmt
readme: some badges replaced by one for ci-cd ([6c9ddfb](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6c9ddfb9777cb344378f5a0d86e204dc016a2068))
### Style
style(config): string normalization, double quotes ([e8edbc4](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e8edbc437b3c6876fae1ff72ad24edbcbe82a8f8))
## v0.1.4 (2023-03-03)
### Fix
fix(readme): license link ([f98f736](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f98f7362dd0278210894f138dd7646c8bc92cc9f))
## v0.1.3 (2023-03-03)
### Chore
chore(Package): updated cookiecutterrc ([822ed3d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/822ed3de8a366644a7285c86facc664d787a7361))
chore(Package): cookiecutterrc ([203a5cc](https://github.com/BAMresearch/jupyter-analysis-tools/commit/203a5cc91f83d740b141dc91b9e93b9d25690c90))
chore(GitHubAction): consistent variable name for documentation URL ([587eae9](https://github.com/BAMresearch/jupyter-analysis-tools/commit/587eae98b3770975e6bb31de09733d630cea997a))
chore(Package): project URL updated ([d9cefee](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d9cefee978ff4a4a3d0a195ea1d3d4802b3a7bdc))
chore(GitHubAction): docs are not build in a matrix anymore ([4b584ed](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4b584ed5fa0771c2b381cc35f284018f705ccce7))
chore(Package): add .cookiecutterrc ([0101f9d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0101f9d19249052dfe29cf2889bffcaf2066b471))
chore(PythonPackage): remove obsolete tbump config ([7a4af2b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7a4af2b183405bcf5df6874154bb6a9c0bc5fa10))
chore(PythonPackage): moved ignored .DS_Store to MANIFEST.in ([cf01d72](https://github.com/BAMresearch/jupyter-analysis-tools/commit/cf01d72028dc1655f59fea084824417dde703ec3))
### Documentation
docs(readme): adjust version numbers in readme as well ([5700694](https://github.com/BAMresearch/jupyter-analysis-tools/commit/57006942e6625faf9f36dca1bac0719706b4d000))
docs(readme): using test.pypi.org links ([240e58c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/240e58c87ef0cf0dc3d195f237a09c8e8a717e75))
docs(Package): update project description ([704a0b5](https://github.com/BAMresearch/jupyter-analysis-tools/commit/704a0b50a727ef36f685d27ce068103ffa60ca99))
docs(comments): add some, remove obsolete ([efe2689](https://github.com/BAMresearch/jupyter-analysis-tools/commit/efe2689707f410a18cce331f9cd3732fa2190640))
### Fix
fix(tox): clean env ([0135426](https://github.com/BAMresearch/jupyter-analysis-tools/commit/013542651eb2bd9a7e2d3b2e8ef837c38501b578))
fix(Package): cookiecutterrc updated ([7b29a17](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7b29a1764f972379086abb51194604423c9714f2))
fix(tox): cleanup env removed pckg build files ([ecd8648](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ecd86485ec0fe67f646d06ca134fe97310f7a3f5))
fix(GitHubAction): migrate to pathlib.Path in template rendering ([d3ae5db](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d3ae5db8f657e929f4139bb17bb746f7b03961d3))
### Refactor
refactor(docs): config adjusted by cookiecutter ([84e00f0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/84e00f061bc5780a0b3457ec95847b266dcfa2cc))
refactor(metadata): update project meta data ([9d6982c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9d6982c960fef68b4c155d05162491f2b6e8b4d0))
### Style
style(pyproject.toml): use double quotes ([8f902a2](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8f902a25b0578babc6e2ad3b72cc7adff94361e2))
### Test
test(tox): find sys Python version when generating files if not specified explicitly ([e690193](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e690193e2a7f3f34dd8457b459c82ec1b9643e0e))
## v0.1.3-dev.4 (2023-02-28)
### Chore
chore(PythonPackage): removed obsolete setuptools requirement ([a479484](https://github.com/BAMresearch/jupyter-analysis-tools/commit/a47948497cba680b6a8ccdaf1fa48c4bd5d0878b))
chore(PythonPackage): removed obsolete version number script ([84a1309](https://github.com/BAMresearch/jupyter-analysis-tools/commit/84a1309702f361cc6ebae72047cd68b8d4316d69))
## v0.1.3-dev.3 (2023-02-28)
### Chore
chore(GitHubAction): jinja macro for setup_python() extended
for using it in tests workflow as well ([7dbf684](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7dbf684ae95f5864970149407de5dc079d1ad63e))
chore(GitHubAction): docs adjust package version correctly ([1a50e88](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1a50e88b5ee40e84a8bf960179907a585921ccb9))
chore(GitHubAction): fix whitespace ([1cd8b58](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1cd8b586b2b7d94ca09c711d0f7287ef726f3d3d))
chore(GitHubAction): fix YAML syntax
of generated workflow files
according to yamllint ([d5a6ef6](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d5a6ef684adeaba5bfe001041c7399d7774c2ee1))
chore(GitHubAction): fix indentation of job steps ([cff1019](https://github.com/BAMresearch/jupyter-analysis-tools/commit/cff1019d7d9cd91a7265b32b10a99a98d011104f))
chore(GitHubAction): jinja macro pip_install_req() ([2f0beb3](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2f0beb397bc389c78c9ca641a07f9f6ca8488fcd))
chore(GitHubAction): removed obsolete job step ([973497b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/973497b4e42c82ecbff8c846ce029077b787268e))
chore(GitHubAction): fix indentation of job steps ([31b7044](https://github.com/BAMresearch/jupyter-analysis-tools/commit/31b70440d89eba31c69130bffe2f0d79a81f87b9))
chore(GitHubAction): jinja macro setup_python() ([37d1b57](https://github.com/BAMresearch/jupyter-analysis-tools/commit/37d1b57e1a4baf21a2b6c2bd74bd3d8b677514a3))
chore(GitHubAction): jinja macro for recurring step in workflow ([affb68a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/affb68aa8bce79dbd7fc1dd2e3cd5f6dd315dde6))
chore(GitHubAction): rename bootstrap script
better reflect actual purpose in updating github action workflow files ([e732926](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e7329260ae4cfd8a62d207538d89b213ac590505))
chore(GitHubAction): reordered job dependencies
build once tests completed, docs need current version number as well, which is set by build job ([0c9ef01](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0c9ef01d19953d2ce724b858ace98626ca762486))
chore(GitHubAction): remove debug output ([2fb6b01](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2fb6b0112892f6d5d2be6731c7df5e18e9de1e17))
## v0.1.3-dev.2 (2023-02-27)
### Chore
chore(GitHubAction): debugging build job ([9eac568](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9eac56850155cb0ce7eb41a4c0c384e7295d0d62))
## v0.1.3-dev.1 (2023-02-27)
### Chore
chore(GitHubAction): debugging build job ([ad8b345](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ad8b345e049a001c82126babf0e3157088fa8892))
chore(GitHubAction): debugging build job ([650ca39](https://github.com/BAMresearch/jupyter-analysis-tools/commit/650ca3918306c6067012ee21d5eea009629edf09))
chore(GitHubAction): debugging build job ([6f95e37](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6f95e3713fcc85e32c76c3734adc9fd6f03c70cf))
chore(GitHubAction): debugging build job ([94b0884](https://github.com/BAMresearch/jupyter-analysis-tools/commit/94b08845ed943cc1de2851769daf66fec3f9c98d))
chore(GitHubAction): debugging build job ([6c2c83e](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6c2c83e9131e5079d65a6669c68fe3a5ed4597e2))
chore(GitHubAction): set prerelease version numbers in build job ([971957b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/971957bcd0a5b132938d6c7d67dc85f0f7325415))
chore(GitHubAction): debugging build.release job ([b727904](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b727904ff733e05af25929056687302fdf79b762))
chore(GitHubAction): runs-on added to build.release job ([50e0c0d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/50e0c0d559d4674f6dcebc5fcdba20bdc5c5aaab))
chore(GitHubAction): semantic-release with conditional prerelease ([ee41ded](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ee41dedd86a172b856f3c1e6983143b2d9fec643))
chore(GitHubAction): fix coverage badge ([cf3e73b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/cf3e73b4963135957c42430da2507bcfd148636b))
## v0.1.2 (2023-02-24)
### Documentation
docs(distrib): generate entries of submodule distrib ([c8055c6](https://github.com/BAMresearch/jupyter-analysis-tools/commit/c8055c65ac1d49a757ee30f9cd34fc18e8445944))
### Fix
fix(Documentation): doctest format in distrib ([5942972](https://github.com/BAMresearch/jupyter-analysis-tools/commit/59429724fd41e62c7717fa185e7f5c5c1e5b50d9))
## v0.1.2-dev.1 (2023-02-24)
### Documentation
docs(utils): generate entries of submodule utils ([762a548](https://github.com/BAMresearch/jupyter-analysis-tools/commit/762a548a967cf54aed7a58f9d84e4cf6e98e25f7))
### Unknown
v0.1.1 ([738fdd4](https://github.com/BAMresearch/jupyter-analysis-tools/commit/738fdd44b27881360f51f540f28cda4aed2e9005))
## v0.1.1 (2023-02-24)
### Fix
fix(docs): allow markdown format in changelog ([593356b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/593356bb0fb6ea7a6c028b99032ed9742708cb6b))
## v0.1.1-dev.5 (2023-02-23)
### Chore
chore(GitHubAction): use tox to build the wheel for uploading ([db60a37](https://github.com/BAMresearch/jupyter-analysis-tools/commit/db60a3799124f252bb532dbc576f2f0dc0e784d5))
chore(docs): show git commit id in footer ([b4dc6cb](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b4dc6cbc15f189cd1fa5d47024199dbb333a9bb4))
chore(GitHubAction): simplified docs workflow ([46f65f3](https://github.com/BAMresearch/jupyter-analysis-tools/commit/46f65f3d1ce33d7b7b0919c996a8c3aa22e56316))
chore(tox): updated tox config for building wheel ([97a4306](https://github.com/BAMresearch/jupyter-analysis-tools/commit/97a43062ed59027d52522e72a20f439b2c6222aa))
## v0.1.1-dev.4 (2023-02-23)
### Documentation
docs(readme): updated links and badges ([2e0329d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2e0329d510bb5c090d093818c0536993c6292a8a))
## v0.1.1-dev.3 (2023-02-23)
### Chore
chore(GitHubAction): split up tests workflow to apply dependency on coverage ([0b66897](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0b6689765f4e43a8c0c6216489fbe53218479945))
## v0.1.1-dev.2 (2023-02-23)
### Chore
chore(GitHubAction): fixed workflow dependencies ([335b82f](https://github.com/BAMresearch/jupyter-analysis-tools/commit/335b82f8ba9637c9a16df8401918da444fc17d4d))
chore(GitHubAction): typo fix ([d730a0f](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d730a0fa858424b2a68525aa26210ca58a144b55))
chore(GitHubAction): separate test workflow, put under main ci-cd workflow ([e92f8d5](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e92f8d598b3664e66a7819a5a51010a88b980d2a))
## v0.1.1-dev.1 (2023-02-23)
### Chore
chore(GitHubAction): test pushing prerelease version numbers ([802f015](https://github.com/BAMresearch/jupyter-analysis-tools/commit/802f015b75dccaf576855d913c026ba807296088))
chore(GitHubAction): set git identity for creating a tag ([1c0339e](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1c0339e68315aa7a147c4a2ef78f9bdb3b403bb5))
chore(GitHubAction): obsolete job for debugging removed ([4cb55d7](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4cb55d7ce677cf7014cd005f654a40bb118922c8))
chore(PythonPackage): running semantic-release on build ([1ddd27e](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1ddd27ed362c47f7023343405692ff7b8570c7a4))
chore(GitHubAction): remove debugging for secret handling ([5cc8879](https://github.com/BAMresearch/jupyter-analysis-tools/commit/5cc8879a860284d2635916e2130aef750a63ee08))
chore(PythonPackage): prerelease suffix changed to dev ([ad616ce](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ad616ce57ad2fe56262c98bcef0077d4f72734ec))
chore(PythonPackage): git sha suffix not supported version numbers at pypi ([5cd5d07](https://github.com/BAMresearch/jupyter-analysis-tools/commit/5cd5d073ddcf6530484ba2d3733041ade2499e71))
chore(PythonPackage): comment on version numbers added ([831bf8a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/831bf8a03639bd6a1e3a376c6cb7b7ee2a27bc87))
chore(GitHubAction): debugging twine credentials ([601021a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/601021ad834662bf096442837db41f50d35edc94))
chore(GitHubAction): debugging twine credentials ([8745ee1](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8745ee140d7e6f5720afe51c836b7fc2e0d439ed))
chore(GitHubAction): debugging twine credentials ([096a205](https://github.com/BAMresearch/jupyter-analysis-tools/commit/096a20566d9d32df271a48122a3827e12366f514))
chore(GitHubAction): debugging twine credentials ([80284e1](https://github.com/BAMresearch/jupyter-analysis-tools/commit/80284e16c83b115c6dcf6ddec66a98fa6af697d4))
chore(GitHubAction): debugging twine credentials ([24e73b5](https://github.com/BAMresearch/jupyter-analysis-tools/commit/24e73b5d9f5c0fa4f48ab15d8d62d417cb71e2b5))
chore(GitHubAction): debugging twine credentials ([d53c227](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d53c22759925704bc64068c39f15f8e04aeccb55))
chore(GitHubAction): debugging twine credentials ([0df6cbd](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0df6cbd14b7dbb803ccd56d3ee22cef6b783d0ee))
chore(GitHubAction): debugging twine credentials ([d92e306](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d92e306b8aef200c0f624a840d002ca50126458b))
chore(GitHubAction): test on ubuntu only, for faster testing ([1a3ba26](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1a3ba26ca02c543ea995fda969db644f42482ae4))
chore(GitHubAction): limit python versions tested for faster processing ([b23d7a4](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b23d7a427fede257d0a4215d8da90f6bfaf1c3b8))
chore(GitHubAction): publish job needs to install required packages ([3228704](https://github.com/BAMresearch/jupyter-analysis-tools/commit/32287049c687dc4f8d095bddf7907a086562dcfe))
chore(GitHubAction): publish job needs to check out repo ([e871aaf](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e871aaf76f73ef206fce7e736125a72bcd6dfaa1))
chore(GitHubAction): syntax fix ([6474942](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6474942c2639d9747e2bd1e7dda7cdc4e5275d11))
chore(GitHubAction): setup Python for publish job ([bb46163](https://github.com/BAMresearch/jupyter-analysis-tools/commit/bb46163effa97ab35916b3efeda9eef7b15e57c9))
chore(GitHubAction): set dev version number before generating docs ([660076c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/660076ce25f1cba798857653d3c642ffb958323e))
chore(GitHubAction): debugging twine credentials ([8db6a32](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8db6a32dd02e29ea2b3da853bc42b1e140066c81))
chore(GitHubAction): debugging twine credentials ([887b96c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/887b96c2ca71cb281fd1ef0eec6db68a2ef6da60))
chore(GitHubAction): debugging twine credentials ([c09fbf8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/c09fbf8cfd0441d90ec09fab257c13521d5da4b2))
chore(GitHubAction): debugging twine credentials ([52e76d0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/52e76d003735747f45d0a8a575901109187b2069))
chore(GitHubAction): moved build dependency to requirements file ([843bd12](https://github.com/BAMresearch/jupyter-analysis-tools/commit/843bd12446fb2362d7967c2e5551125dcc005e10))
chore(GitHubAction): moved build dependency to requirements file ([803fd94](https://github.com/BAMresearch/jupyter-analysis-tools/commit/803fd94f71b9c74f33c5f430c91447f24830ec0a))
chore(GitHubAction): typo fix in twine cmd ([7ae601c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7ae601c54167e2caacc458a1758bcbb91a34b3f2))
chore(releases): version config updated ([eb2d5fe](https://github.com/BAMresearch/jupyter-analysis-tools/commit/eb2d5fee7e75ec371e3b2772534a121c3d0112e2))
chore(GitHubAction): updated twine config ([bfec290](https://github.com/BAMresearch/jupyter-analysis-tools/commit/bfec29095658b5ef0fee84c47a2a8f1527944de7))
chore(releases): config for semantic-release ([11452d3](https://github.com/BAMresearch/jupyter-analysis-tools/commit/11452d39090633242455fe1b8cbfe40de41839a2))
chore(PythonPackage): removed setup.py, obsolete ([d6f2aed](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d6f2aed7653e47ff223186daf64afb884225f4be))
chore(GitHubAction): install twine before using it ([6561d70](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6561d70a30128acc987d39294a8a4360ae7582a6))
chore(GitHubAction): calling twine directly for uploading to pypi ([2c7b2da](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2c7b2da264fc1a6aaaeb6187145263cc3a5e1ab6))
chore(GitHubAction): fixed build workflow ([be22d37](https://github.com/BAMresearch/jupyter-analysis-tools/commit/be22d3743caa5d74ea6859eba147b9c2ab3a094b))
chore(GitHubAction): fixed build workflow ([6003c4e](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6003c4e0a697c3efbc917102ee400440d275feda))
chore(GitHubAction): fix to swap quotes ([5fed8f8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/5fed8f8e521b9b700f0ab3a00182ebef1dad886e))
chore(GitHubAction): test if python needs to be setup for publishing at all ([60afc13](https://github.com/BAMresearch/jupyter-analysis-tools/commit/60afc13569718cf324ebbccbe3a37352e608cbb4))
chore(GitHubAction): add required module at the right place ([c2c8769](https://github.com/BAMresearch/jupyter-analysis-tools/commit/c2c8769f9b4787c1695985384baa30f29a74fd71))
chore(GitHubAction): module required for building packages ([8261466](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8261466f69c06a38adfadaf81dc47bf93e3d0888))
chore(GitHubAction): workflow for building packages ([493d0d2](https://github.com/BAMresearch/jupyter-analysis-tools/commit/493d0d2f3f85a6c48465610e79a916c329268dc2))
chore(GitHubAction): upgrade pip in templates too ([f23f8c8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f23f8c8617199e5dc1a5d252e103186c91e1334a))
chore(githubAction): upgrade pip before installing more deps ([26295b6](https://github.com/BAMresearch/jupyter-analysis-tools/commit/26295b66a6c6c992844e622d7d7ecfc80b76a3f1))
### Documentation
docs(config): clean up version definition ([c18c67f](https://github.com/BAMresearch/jupyter-analysis-tools/commit/c18c67fae8852f2acdd79ffe3bcb89aa5821c797))
docs: removed disabled config ([3059ff9](https://github.com/BAMresearch/jupyter-analysis-tools/commit/3059ff9fba6a17b845441cd283c0f498c05beab2))
docs: disabled incompatible sidebar config with furo theme ([61959be](https://github.com/BAMresearch/jupyter-analysis-tools/commit/61959be18f26e304042c21872f50dda23635caae))
### Fix
fix(tox): removed tox-wheel settings
tox supports building wheels since v4 ([cacbfe3](https://github.com/BAMresearch/jupyter-analysis-tools/commit/cacbfe36af39f613efc4651bed4c8875c80c60c5))
### Unknown
GHA: show available tox options ([ccce3b0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ccce3b06104f540965bc8b0321e3cc301c826e34))
GHA: pip cache disabled for testing ([18371d5](https://github.com/BAMresearch/jupyter-analysis-tools/commit/18371d53beb662f945b7b4d8ff40b3c70163fbb5))
added tox-wheel to ci required packages ([7eae72c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7eae72c4a2e977c3efc56b5d9c8da76d67d44536))
readme: updated badge for docs ([6e78a50](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6e78a50e5b9b7c47498cdb7bc3c4a493a1cacfe3))
GHA reorganized, general python version set in bootstrap ([ddded7b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ddded7b39dc968b38a724eafcb98087c7b113620))
GHA reorganized, syntax fix ([8b3c7c2](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8b3c7c22aac647f5e69c9a586a0f3b431a952f6c))
GHA reorganized, updated template to current workflow ([51dce0d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/51dce0dec931d7f14de6e8471865c07ebc4fdd97))
GHA reorganized, run docs workflow from main wf only ([6d2ce58](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6d2ce585f2f408c44b3fcc8bd7c219b76a06aa46))
GHA reorganized, little fix ([692a145](https://github.com/BAMresearch/jupyter-analysis-tools/commit/692a145559990daf84f7f99e44b1cf1c95a117e2))
GHA reorganized, moved docs to separate workflow ([9970f71](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9970f7105319cf5a8b33744e0f0c88adb17d1bca))
GHA reorganized, moved docs to separate workflow ([15b5fe0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/15b5fe08af9ab4a6ec8095d681315003304ba203))
GHA reorganized, some fixes ([677bf07](https://github.com/BAMresearch/jupyter-analysis-tools/commit/677bf0745dc58c22ca18b84b0a795ee4386ae798))
GHA reorganized, more fixes ([aa768a5](https://github.com/BAMresearch/jupyter-analysis-tools/commit/aa768a55e02f5aefc2be3a6981fafaab3c22b8c7))
GHA reorganized, more fixes ([185519a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/185519a7cd449784d0f60a7c73767666553a2c47))
GHA reorganized, more fixes ([48ca3b6](https://github.com/BAMresearch/jupyter-analysis-tools/commit/48ca3b6748bd289b4539e7a60cf4aa3ee913db61))
GHA reorganized, fixes ([4ddab64](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4ddab64307dde686e62a390dff204a5a887faa82))
GHA reorganized, fixes ([fcfeba0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/fcfeba0fc4877f7f440ec26d1cef2bd8eed86080))
GHA reorganized, fixes ([1e89f0b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1e89f0b0ae2d6fac9840253cb52bb550d0175a61))
GHA reorganized, fixes ([37a6133](https://github.com/BAMresearch/jupyter-analysis-tools/commit/37a61331786cb134766d9a8cb210695c40363f98))
GHA reorganized, testing ([f43f9ae](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f43f9aefd444a1585df69c72ec44d0db57a95d37))
comments added ([af59a8a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/af59a8a01d7891a35a2c1b9a76f303b5dfb1139a))
updated GHA bootstrap template ([0932c61](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0932c61d27fdee1686256454b45f728c13d2dfa0))
readme: fixed link to coverage report page ([1e173dc](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1e173dc08abec18fb231dc56432bab3b1244b614))
GHA coverage: fixed report url ([5f67507](https://github.com/BAMresearch/jupyter-analysis-tools/commit/5f675073bcb71d004abc79d89d3583232c8073b0))
GHA debug coverage combine errors: fix path of json file for badge ([e27d159](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e27d159829d2a81ee7e9c9f2e720fc71c0bc0bfe))
GHA debug coverage combine errors: fix path of json file for badge ([5a2b4fd](https://github.com/BAMresearch/jupyter-analysis-tools/commit/5a2b4fd5d723137cfdee177a5691e880c83dd67b))
GHA debug coverage combine errors: fix git add paths ([308066f](https://github.com/BAMresearch/jupyter-analysis-tools/commit/308066f8fc00c61a8eaf8a225993dd94f39c5d66))
GHA debug coverage combine errors: testing GH env vars ([7939753](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7939753baad0f9c64783c6019cc6e8475a48159b))
GHA debug coverage combine errors: test more path mapping ([9e59c4e](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9e59c4ebdc73f2831a5343b1ac2baef11e4adbcc))
GHA debug coverage combine errors: more path mapping ([67f7221](https://github.com/BAMresearch/jupyter-analysis-tools/commit/67f722133068fdd0383c2bd4f406ab662bf50366))
GHA debug coverage combine errors: show stored paths ([b7f6c9a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b7f6c9aea32db8d35876bea468d318d8b9e50d52))
GHA debug coverage combine errors: show path mapping ([75d2ea9](https://github.com/BAMresearch/jupyter-analysis-tools/commit/75d2ea95557727c3117bce691c8f0db738d41f65))
GHA debug coverage combine errors: handling subdir tests similarily ([7a8dcf5](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7a8dcf577a0ada5b20deceedde3cb16c00cec8c6))
GHA debug coverage combine errors: do not lookup non-existent file, forgot removal ([dd4a886](https://github.com/BAMresearch/jupyter-analysis-tools/commit/dd4a88654cd0e2d66212e47e6b9267b6697ec982))
GHA debug coverage combine errors, abs paths differ between platforms ([70071de](https://github.com/BAMresearch/jupyter-analysis-tools/commit/70071def90995145d9244a88971b987aed1cdd8b))
GHA debug coverage combine errors ([e6507ed](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e6507ede7f01997560e02bfa21ac0d64f63b001f))
GHA debug coverage combine errors ([4f54c5f](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4f54c5fc3a3088a80162f4da330247f18700caff))
GHA debug coverage combine errors ([51511e8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/51511e8a32c35725dfe9cec71b557f1aa86686bd))
GH action coverage: Skip files with no code ([55cf268](https://github.com/BAMresearch/jupyter-analysis-tools/commit/55cf268aeedc0d24631358dea64109e491e1e1a9))
docs env needs toml module for reading values from pyproject.toml ([6a2d755](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6a2d7555ce44ff820f3375dca9cd0714a2e54c49))
applying isort config
single line for imports from same module, saving space ([02c6bbc](https://github.com/BAMresearch/jupyter-analysis-tools/commit/02c6bbc9cd0cd06375bd263efb072d9f0116ac69))
updated isort config ([78e38e9](https://github.com/BAMresearch/jupyter-analysis-tools/commit/78e38e9d298bc384695c9104195f749cdcc6a52d))
docs config: using urls defined in pyproject.toml ([33d5f23](https://github.com/BAMresearch/jupyter-analysis-tools/commit/33d5f2338e3a95212c21396d9007bac1495f30a8))
moving isort config to separate file, not picked up from pyproject in a pre-commit hook ([bfaf1e0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/bfaf1e0ab5be225e5e4c34ffc8b1ea8bedb59688))
minor formatting of GH action bootstrap template ([9f935bc](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9f935bc5f042766b83aeb70e60312688186842ee))
pre-commit uses pycqa repo for isort ([4b4a31c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4b4a31c15e9a07455fe9796e17ddbce5f23456ed))
updated pre-commit hook versions ([4fdec5c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4fdec5c7bab285cb53665d23d063c3ef117ce077))
docs switching theme to furo
https://github.com/pradyunsg/furo ([ceab414](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ceab4148b9fbac53f5ffd936da15f39bedfad968))
updated GH action workflow from bootstrap template ([87e1b2b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/87e1b2bd809295c4c960333a048cc3098355a424))
Adding upload of generated docs to GH action bootstrap template ([6337839](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6337839d317a14d3f2f8989bc8f1615c60fa826c))
GH action bootstrap template using values defined in pyproject.toml
for documentation url and path to coverage reports ([f59959d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f59959d4c52f868a5f3eeadfe67294026fec75bd))
moved project meta data from setup.py to pyproject.toml ([a73f9a7](https://github.com/BAMresearch/jupyter-analysis-tools/commit/a73f9a7c52df781bffcf388a2e5932573bbc51a7))
removed obsolete dependency from github action template ([0d071bc](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0d071bc80d627395a569d007f05ba26e880ad28b))
tox: removed coverage combine for single runner, useless ([831fa6b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/831fa6b16ac6053dfff570ca3098e4610709b039))
GH action syntax fix ([38574da](https://github.com/BAMresearch/jupyter-analysis-tools/commit/38574da969c6ba1669095a4f5797e5ba9e91f770))
GH action updated for building docs with an tox environment
and uploading the build results to pages, replacing old build_docs job ([23c980b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/23c980b6a90ec71520392684b6a7a7c04db8a97d))
tox: updated bootstrap template for github actions ([47528b8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/47528b8c2705a4f80339561d877f14038ab19691))
tox: build env for package building ([91969bb](https://github.com/BAMresearch/jupyter-analysis-tools/commit/91969bbe7bf7e69f006e439166db2d7ff62a063e))
tox.docs: generating placeholder for github pages;
disabled doctests by sphinx which are run by pytest later anyways ([bcaaa54](https://github.com/BAMresearch/jupyter-analysis-tools/commit/bcaaa5448d764b7969f1885740b4914df74ed965))
tox: coverage combine command added ([bc45701](https://github.com/BAMresearch/jupyter-analysis-tools/commit/bc45701fc9cf656aa191b2b61df60d10f448be4f))
readme: removed unused table def ([9665ccf](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9665ccf5f5f3d753135dcdf477c09f9212f512eb))
GH action: cov report directory singular ([a8f6c8a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/a8f6c8ae2a1ea3be5b466b042946b089b3244950))
readme: coverage badge added (from report) ([6570cf1](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6570cf1a6c7036a8998536740867819a52ed084b))
GH action: remove gitignore from reports first ([ffd4281](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ffd42815fc0c59943e0e911ced55bde40edb320d))
GH action: fixing coverage report publishing ([802b130](https://github.com/BAMresearch/jupyter-analysis-tools/commit/802b130c1478d5da05079eecdf29a986e0c2022a))
GH action: missing packages added ([128b3db](https://github.com/BAMresearch/jupyter-analysis-tools/commit/128b3dbebde3977b3030606a6517894b14995152))
GH action: removed some runners for quick testing ([e9671ca](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e9671caf4573f6d03f88d06393f69ad3639115b9))
GH action syntax fix ([0b0021b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0b0021bc087cf39b7209ea98c55736126de70472))
GH action fix; removed non-exist docs badge from readme ([86cbbe1](https://github.com/BAMresearch/jupyter-analysis-tools/commit/86cbbe13540ff4691f2d7d2aa05007d09aacf56e))
GH action logic fix ([1b94f49](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1b94f49a9e27f2c6819b83f6fe0fcd6a465d4b76))
GH action syntax fix ([37b182c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/37b182c3ea20652f39891021e8598a37e218889b))
fix for GH action for coverage report ([f05dd01](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f05dd0134f119b62ee64446e05bcb542ba22b001))
GH action adjusted for coverage report publishing
along with documentation in gh-pages ([d7c36a4](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d7c36a4e4f2bf4574fe9ab2db2888da926b19ab7))
tox config format fixes ([210b5e3](https://github.com/BAMresearch/jupyter-analysis-tools/commit/210b5e39a37ecdf1abaf083379e05fa8d5e6726a))
Testing: updated GH actions workflow ([9a5abf1](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9a5abf1c2bfc28785ebb54a6d9c25a20635f3fec))
readme: download numbers from pypi ([7082226](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7082226643aef7bcdd4d42d3109653e77fde230c))
readme: minor formatting edit ([645e0f8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/645e0f8f87965e5e42e807bbbb573b861ab7f1c9))
readme: adjusted badges ([343dc81](https://github.com/BAMresearch/jupyter-analysis-tools/commit/343dc812104a84eea4fe028656edb4befaefb8e5))
updated versions of employed GH actions ([3061775](https://github.com/BAMresearch/jupyter-analysis-tools/commit/3061775f58d566fecee64cb78cca33a5957a98d4))
fixed broken link ([e41268d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e41268d735e8ad78692db43b8581975993946782))
removed missing tbump.toml from manifest ([1a54907](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1a549076017a9608d33b428e750216db8d135ead))
Dependabot config ([4578709](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4578709355e0d4ad839b61f42ff2af01c85ee7ff))
## v0.1.0 (2022-11-10)
### Documentation
docs: let sphinx use numpy directly instead of mockup
fixes issues with numpy members ([9b6ec6d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9b6ec6d3f4123b8bfb0934cdb2e8a0df0933daee))
docs: sphinx extlinks syntax updated ([0866ee7](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0866ee71cbfa5b8f1134858a44fe8e360707faec))
docs: URL updated ([146039c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/146039cc13670cfc62ca295935567e14ba38d738))
docs: fix docs gh workflow spec ([49d7e93](https://github.com/BAMresearch/jupyter-analysis-tools/commit/49d7e9305987cb918e3ea3c812c7aeac2fe36c56))
docs: fix gh workflow spec ([b977751](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b97775186b5554a9bf260c6ad34ed63481571eae))
docs: fix gh workflow spec ([e23c22c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e23c22cae9045a75c7ff41ddffdd44c93fd027da))
docs: fix gh workflow spec ([024295d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/024295d797da7274071cf54085d614a2f8e96a53))
docs: fix gh workflow spec ([12adda9](https://github.com/BAMresearch/jupyter-analysis-tools/commit/12adda94ad39ce9c4e61687cdbf829c196ff81ed))
docs: fix gh workflow spec ([f062d12](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f062d12d3f2cb430c643228573cf76aef31dfee6))
docs: updated urls and gh workflow spec ([66a0704](https://github.com/BAMresearch/jupyter-analysis-tools/commit/66a07049567a524a82633547c8006ed1630238c1))
### Unknown
tbump config updated ([e17de91](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e17de9111659992b9419efc7e07c58172737e285))
package classifiers and readme updated ([4cafdca](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4cafdca402cb8171b7ab32de4c93feeb94e00af4))
tox: removed passenv=*, more strictness ([818ffa1](https://github.com/BAMresearch/jupyter-analysis-tools/commit/818ffa1a590e42aa2599679755ffaeea794d346f))
moved tbump config into pyproject file ([b8b9881](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b8b9881fec80199ec5e730d33fbb5a427acfd9c1))
isort excludes .ipynb_checkpoints ([db90f62](https://github.com/BAMresearch/jupyter-analysis-tools/commit/db90f62015abc54088eae146419863ff9a1c38ac))
flake8 config updated ([20a46bc](https://github.com/BAMresearch/jupyter-analysis-tools/commit/20a46bc9ca8d09f79795d10b91ee759042045f08))
reformatting according to pre-commit config ([54fd524](https://github.com/BAMresearch/jupyter-analysis-tools/commit/54fd524c6791ec3ac6a7f95a153bf739c35bf8d1))
tox:check: let check-manifest ignore macOS meta files ([d301bd2](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d301bd2d02d5030e7c50071187bb6f4ea895c63e))
gh: removed obsolete testing.yml ([1ce898d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1ce898dfc5c547bbef27e159cc377478f26d39d5))
readme: updated badges ([790bf44](https://github.com/BAMresearch/jupyter-analysis-tools/commit/790bf44e76f1f25959672536cbe6c588efe2ac17))
readme: updated badges ([99ddde2](https://github.com/BAMresearch/jupyter-analysis-tools/commit/99ddde2155dab5bbda3b632d58576a85f3dbf701))
readme: updated badges ([f18418c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f18418cc52850c6622c4cc0ab6ceb01f4e4839eb))
readme: fixed badges, renamed testing -> tests ([3efb28f](https://github.com/BAMresearch/jupyter-analysis-tools/commit/3efb28fdfbef47fd6a776fada5a7f0b8804a4fa7))
removed pypy test environment from github actions ([17f8515](https://github.com/BAMresearch/jupyter-analysis-tools/commit/17f8515fda7746b6c43e4e2ff94fedce95e9a2ae))
removed pypy test environment ([e2cfa0a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e2cfa0adbfdf3b3d927949a5f43e37ae1367911a))
conda_environment.yml not needed anymore ([b28806f](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b28806f0f8aa7faa60b6162b05a84386e72e4f1c))
tested testing config, enabled doctests ([a273d9d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/a273d9d218ca151f19623fd7b978557e23a55ea2))
generate github testing workflow with tox ([f04bb7b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f04bb7bae96a417d56d545be61423930a210fa4a))
tox:bootstrap: don't fail for macOS .DS_Store files ([0445011](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0445011ea7721471aa6caee06565062d041a6110))
tox setup added and works partially ([4956d25](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4956d2573999ed7fd5aeb5dc8f22b99ef5e6c6da))
moved implementation to src subfolder ([a917c30](https://github.com/BAMresearch/jupyter-analysis-tools/commit/a917c30fbfabd5f14666b36305484f3d8dee8cd6))
updated gitignore ([2499639](https://github.com/BAMresearch/jupyter-analysis-tools/commit/24996396b32b4991cfb9450e028f0d73b3fff138))
readme: updated docs gh workflow badge ([3bb0b40](https://github.com/BAMresearch/jupyter-analysis-tools/commit/3bb0b40ffd5c95869151efa5274e1b4e9bc5ec60))
documentation setup ([fa494d0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/fa494d05c78ec8ccd6d98caedd0c67479bc301bb))
editorconfig added ([61299aa](https://github.com/BAMresearch/jupyter-analysis-tools/commit/61299aa1904401865aa169112acdada96d29f5fe))
pre-commit config added, running reformatter, import sort and flake8 linter for the first time ([0537b68](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0537b68cc3e139911e7b65b2bb4d72ca9d85dac9))
let git ignore macOS meta data files ([6e35aa3](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6e35aa33bbacb4bf3a2dc041c59aee17ae793f13))
distrib: removed radius-specific scale factors when converting (LogNorm) distribution parameters
adjusted doctests
changed float formatting to cover broader value range ([bf7bcca](https://github.com/BAMresearch/jupyter-analysis-tools/commit/bf7bcca230d1d3aeb0c3aea41035b71180d33a01))
distrib.Distribution.xlabel added
flexible subject of distribution
allows description with units for plots
removed radius-specific labels ([30ad6c1](https://github.com/BAMresearch/jupyter-analysis-tools/commit/30ad6c138545afb08f1c68466405f8dd09d0cfab))
indicate python raw string to protect LaTeX commands ([4483cb5](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4483cb525b50aa04a5f9105a1910e333880e3110))
utils.setPackage() prepend local module search path ([247973a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/247973af69237825dd8f4def2accef20b2941c47))
distrib: handling logNorm params distrPar as dict now, doctests added
in favour of pandas.DataFrame conversion
changed input/output format of distrPar… helper functions ([0aad717](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0aad7179132ec90f715badd0f89e99adb86e7016))
readdata: fixed imports, allow disabling info output by print_filename arg ([aa1cf22](https://github.com/BAMresearch/jupyter-analysis-tools/commit/aa1cf22f9af49db58a43be7feaf76206d6a84af5))
readPDH replaced by a pandas.read_csv wrapper
readPDH corrupted data before by replacing the uncertainty column by the a copy of the first column read in ([9d3c6a4](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9d3c6a45b5875e45289d6678695b2cc3d387cbfb))
fixed __init__ ([55e9d20](https://github.com/BAMresearch/jupyter-analysis-tools/commit/55e9d20dc75fad8e73c459a96d351043ace693f4))
readPDH: detection of XML section updated ([096521f](https://github.com/BAMresearch/jupyter-analysis-tools/commit/096521f678ca4c8e42161b2b59550a0f8cc636e3))
gh action: enabled testing on all platforms ([45e203c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/45e203c73bcba0eca42cf02d2a9e129f0702b826))
gh action: testing the latest python versions ([452ec3d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/452ec3da6bc015e64e63549e0a0a8566fe041c9c))
gh action: removing debug output ([6f75e48](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6f75e48313946fb407d136c9eca65abad2adec70))
gh action: testing conda environment setup ([6644b09](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6644b093b7332fec4bd0918b977e3f3b10bc7956))
gh action: testing conda environment setup ([58f318c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/58f318c9fe2d6b66a80440bff6d95427d0934b09))
gh action: testing conda environment setup ([46bd4e0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/46bd4e0d7811da2b5835485ed522fb3a956b1b72))
gh action: testing conda environment setup on a single runner for now ([94baf5b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/94baf5b8f32fb3294204e346c520cc777cc2fb8c))
gh action: setting up conda environment ([01aeaae](https://github.com/BAMresearch/jupyter-analysis-tools/commit/01aeaae78e08a0ed1e6df32d92d101f778c8b982))
gh action: setting up conda environment ([003e018](https://github.com/BAMresearch/jupyter-analysis-tools/commit/003e01878d9f4c79b7da7c8d15fe50fe31c410a5))
gh action: investigating conda environment ([4f89ffb](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4f89ffb3288f4a3e6c95bad031857f3593937bb6))
updated GitHub Action ([7844e90](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7844e90b2457dea869fa96cdd9b1d1e5f341439f))
utils: moved jupyter notebook related helper to separate file/module
avoids unnecessary dependencies elsewhere ([4bbee4e](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4bbee4ef4dde0a8591215afdd527f74f9b44d303))
testing workflow runs doctest on utils module ([6d19fd4](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6d19fd4a2bf9dd1250707bc5b02f8d375865aff3))
utils.isList(): doctest added ([f27855d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f27855dff40990b98a901d0f8d0f7981deae3332))
testing workflow: fixed python versions ([a71e60e](https://github.com/BAMresearch/jupyter-analysis-tools/commit/a71e60ea8173d0549b8f8bfd3e9d03d93dab52e8))
defined new github action for running tests ([3589299](https://github.com/BAMresearch/jupyter-analysis-tools/commit/3589299bd25d5c9e7822fb96a9f73badb43d39f1))
Distribution.uncertRatioMedian() added ([8a2ef2d](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8a2ef2d44237c33c617cad02ce16309b1984f648))
distrib.getLargestPeaks: fixed sort order of largest peaks ([9cca28f](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9cca28f442a75bba1097c670ab3c3c10d6578fa2))
show LogNorm params for each peak ([64b60e7](https://github.com/BAMresearch/jupyter-analysis-tools/commit/64b60e7094ff980dd8eba0a12e83fa1dd5f4ef4c))
introduced distrib.Distribution for finding and plotting peaks ([6beadf3](https://github.com/BAMresearch/jupyter-analysis-tools/commit/6beadf3ae55330ec5ec362263f2afef449fa0080))
analysis.getModZScore() calculates the modified z-score of some data arrays ([2250a59](https://github.com/BAMresearch/jupyter-analysis-tools/commit/2250a59f4aca728ccf79b041b5e148835afb3182))
distrib.findLocalMinima: skip peaks with less than 5 points
unlikely to contain additional minimum ([712d590](https://github.com/BAMresearch/jupyter-analysis-tools/commit/712d5904218beb9e129d30fb7f6dedb84e050175))
distrib.findLocalMinima() fail gracefully on single peak ranges
if it can't be fitted ([45eb76b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/45eb76b5ab67ad0d190c88ff4e6846e16e446994))
plotting.GenericResult with x-axis label ([1a14688](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1a1468808a0fb0458a6b8a06051ec6dcb7434edd))
missing numpy import ([8c01e86](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8c01e86c26f0c1a500ad21174189fba1ffb08836))
added plotting.GenericResult ([96cf6c8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/96cf6c8f7062fce9b83404e3f86658d6a9e73bc4))
distrib.normalizeDistrib: convert pandas.Series to numpy.ndarray first ([a50f78e](https://github.com/BAMresearch/jupyter-analysis-tools/commit/a50f78eded5f12f3204a25046b3b6f4ed6164562))
distrib.findLocalMinima() added
separates multimodal peaks reliably ([0ac94c7](https://github.com/BAMresearch/jupyter-analysis-tools/commit/0ac94c760f93bfa53bc823d1ccec8901eb5af306))
distrib.findPeakRanges() filters monotonously increasing/decreasing 'peaks' (artefacts) ([7b967c0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7b967c00772bea6adce2e735d9c4f54bc1e70d18))
distrib.distrParFromPeakRanges: convert pandas.Series to numpy.ndarray at the beginning ([bb19270](https://github.com/BAMresearch/jupyter-analysis-tools/commit/bb192703cece3027d5766f66c8c5a9c27f61df32))
distrib.test: fixed indents, replaced tabs by spaces ([da8f402](https://github.com/BAMresearch/jupyter-analysis-tools/commit/da8f40236fd5906bbc8c28a36ce8eadd1f2b8c36))
plotting: increases limit for warning about many plots ([ef8a6fd](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ef8a6fd7ff86941eef5f45af38d644a1a048bfef))
plotting.plotVertBar() now with kwargs being forwarded to matplotlib ([35dbce1](https://github.com/BAMresearch/jupyter-analysis-tools/commit/35dbce14a89472aa121483ab96078bcd9270d9f7))
utils.updatedDict() added ([03fe42c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/03fe42c0702efb7a49493c96f4d5768f72c8e86f))
isList() moved to utils ([4367a6c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4367a6c2c1245a5c3cfb071afd3bccdd96591cb3))
datalocations.getDataFiles() argument handling lists and non-lists ([4ee348a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4ee348a8f5caebac6f4c4009e5f999abe05237a0))
datalocations: filtering file names with in-/exclude patterns ([d65efff](https://github.com/BAMresearch/jupyter-analysis-tools/commit/d65efffa2df938033443ba54fa09570eaf4afbc3))
datalocations.getDataFiles() with filename pattern argument
removed DLS specific file extension matching ([7d10c9c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7d10c9c237f8b48a9c6b8ced05a7bb92c2016ec8))
plotting.createFigure(): fixed argument ([ba6ae3b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ba6ae3bc2e1ddde3fdda9b9e0bc02b58dcf2ed6b))
added modules for plotting and distribution helpers ([3472db8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/3472db8e9217c9ae0fa1bb3a078e0af04d3328cb))
utils.fmtErr() ([56457ae](https://github.com/BAMresearch/jupyter-analysis-tools/commit/56457ae8a37ff474165c2c9959e115f8c341c48c))
utils.grouper() ([a5ad6aa](https://github.com/BAMresearch/jupyter-analysis-tools/commit/a5ad6aaf80c1dc6be417fd20c22c84c93046dd88))
utils.setPackage() added ([969aae8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/969aae82848b53a0d6257877011dc89e3eb10852))
datalocations module added ([f4fb7ff](https://github.com/BAMresearch/jupyter-analysis-tools/commit/f4fb7ffd0dcc2eab2319e257d0c8dca5be1d6d75))
utils: OS helpers and for 7-zip added ([629c0fa](https://github.com/BAMresearch/jupyter-analysis-tools/commit/629c0fab2e2a9012b76e069ed199107ab6e2e179))
utils.setLocaleUTF8() added ([8dc76f3](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8dc76f3be20b754df2631a6655fc5918ceed72d3))
minor: line endings converted to UNIX style
(default for jupyter and notebooks) ([45d3535](https://github.com/BAMresearch/jupyter-analysis-tools/commit/45d353595dcbfdc864a02225475532c4d7825d22))
reBin: removed unnecessary whitespace ([65e622b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/65e622bae6f73eef4f4d3f946ec038c33e97d50c))
reBin: show help when called without arguments or files ([1c8244c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1c8244cbfbbfd1373254069bb04062f3e6baeee0))
reBin: fixed python3 compat. ([05468c0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/05468c0784d33fc8e8ecea686f06d0216e7f7aa7))
disabled nbstripout checks
jupyterlab git extension handles cell output fine now ([8835ff0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/8835ff05cf91c42c470c7f572da8af179a9b8866))
license added ([10bb685](https://github.com/BAMresearch/jupyter-analysis-tools/commit/10bb68573b9b2dd66370bd8bf277d0aa9e354724))
git: check if installed at all ([80e7328](https://github.com/BAMresearch/jupyter-analysis-tools/commit/80e73289d376d18ca7ae135e4ae3d0249a724bf2))
handle exception if git submodule is moved out of parent repository ([fb382bd](https://github.com/BAMresearch/jupyter-analysis-tools/commit/fb382bd3508c8c35aa796b89e765220280cec6c1))
added showBoolStatus() to pretty print the value of a boolean variable ([b00316c](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b00316c60cd5036750104961e7c10337df5a451a))
added PathSelector in widgets module ([189b56e](https://github.com/BAMresearch/jupyter-analysis-tools/commit/189b56e1a0af30876013bf676577c2bd4d9e1183))
git: using full python path for running nbstripout during checkRepo ([1fbe3cc](https://github.com/BAMresearch/jupyter-analysis-tools/commit/1fbe3cc93f778f69dc34e569fc54d0906268357a))
set git status text always transparent ([9e5943f](https://github.com/BAMresearch/jupyter-analysis-tools/commit/9e5943fac800ff3385cc2ebb058d3c95608533a0))
git: partial transparent git status if repo is clean ([b2fc0e9](https://github.com/BAMresearch/jupyter-analysis-tools/commit/b2fc0e9e1020c1fcd36cb2a35ab3edd6cc50feb3))
fixed git module: using subprocess instead of ipython syntax '!' ([95e7851](https://github.com/BAMresearch/jupyter-analysis-tools/commit/95e78510aaba7ceeab4515b226f8aad486140424))
functions for git repo status added ([4c1f620](https://github.com/BAMresearch/jupyter-analysis-tools/commit/4c1f6201707e3bb5591614eae102b8e63abf4972))
fixed encoding header info ([8375642](https://github.com/BAMresearch/jupyter-analysis-tools/commit/83756420fab8f3851ce881f54744a2caba20e19d))
use proper boolean operator ([94fc592](https://github.com/BAMresearch/jupyter-analysis-tools/commit/94fc59229261b4acf8e6f32027a4649f133291ad))
diff.textconv and filters for IPYNB and XLS files ([ec97ca4](https://github.com/BAMresearch/jupyter-analysis-tools/commit/ec97ca423a0353c0d82c4c77b141f3a14602e8c8))
added pycache to gitignore ([7650b60](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7650b60079190303a1570caaa3c8016ecd74dd92))
fixed module path ([e7f866a](https://github.com/BAMresearch/jupyter-analysis-tools/commit/e7f866a13044a5b064f3b94bfa8cb15159ea9af3))
removed Jupyter startup scripts, not needed here ([c0e07b0](https://github.com/BAMresearch/jupyter-analysis-tools/commit/c0e07b0675efe51dff549f7526371947b76e8bff))
init file to make up a proper python module ([7b984da](https://github.com/BAMresearch/jupyter-analysis-tools/commit/7b984da192d03a586941374755514f5b11515bf2))
small-angle scattering data rebinning routine by Brian Pauw ([eae62d8](https://github.com/BAMresearch/jupyter-analysis-tools/commit/eae62d8f317b19d3b3022ba6285df0df4ecd1f9b))
code for parsing a PDH file ([af59678](https://github.com/BAMresearch/jupyter-analysis-tools/commit/af59678ff824dfade45b8c18b83ee390b1f14413))
Jupyter shortcuts added ([85a8b9b](https://github.com/BAMresearch/jupyter-analysis-tools/commit/85a8b9b6c85065fa1d4491efbf479973e4c8e238))
Initial Commit ([645ef06](https://github.com/BAMresearch/jupyter-analysis-tools/commit/645ef06938f90d3219c17f74c23d9e610c5a1753))
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Hashes for jupyter-analysis-tools-0.1.6.tar.gz
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | f03544424fdd02d6cbbac048ba1f230cc2793ffc83c8c8111265f6331aa556a7 |
|
| MD5 | 65a4612897501eedb92ad03f0aa1b60b |
|
| BLAKE2b-256 | dc3919a0880d52aa07f70f864c89b49fbc5ea92c96f9ca5c14b767f4a3ada81d |
Hashes for jupyter_analysis_tools-0.1.6-py3-none-any.whl
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 | 4ab1ba8ac4005720a8aad01421a2b167d4d806cd8e01f0b4627fce449387a77c |
|
| MD5 | c889646f5b564bacb459ba1ad531918c |
|
| BLAKE2b-256 | 712bac561281176d369a6efbd210c1e53dc979cb7496914b868076ff293c7e4b |
