Kinetic sequencing analysis by Chen lab at University of California, Santa Barbara
Project description
kinetic sequencing: high through-put kinetic parameter estimation for genetic encoded biomolecules
Issue report:
https://github.com/ynshen/k-seq/issues
Installation / update
This is the temporary installation for k-seq package before publication, we will upload to pypi so it could be installed through pip install k-seq
Step 1: Clone the this git repo to your local
> cd /dir/to/save/repo
> git clone https://github.com/ichen-lab-ucsb/k-seq.git
Step 2: run installation code
> cd /dir/to/save/repo/k-seq/
> sh ./install.sh
There might be a prop to uninstall the old k-seq package, if installed.
To varify the installation of package
> python -c "import k-seq"
# No error shows
Getting started examples
Getting started
Getting started notebook to run interactively: /examples/getting_started.ipynb
See documentation website for usage
TODO
- Clean up archived old code and notebooks
Release history Release notifications | RSS feed
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