implementation of the rest API to access the kegg database
RESTrequest(*args, **kwargs) -> response string
create a request to the KEGG url, is the basis for all the other call.
Take as argument the pieces of the rest call.
KEGGlink(db1, db2, **kwargs) -> (dict, dict)
evaluate the connection between two databases, return two dictionaries
of list that gives how each element of the database is related to the
elements of the other
KEGGconv(db1, db2, **kwargs) -> (dict, dict)
convert between one kegg database and an external one. currently supported
are the uniprot, ncbi-gi and ncbi-geneid for genes and pubchem, chebi
for chemical compounds. Return the two lookup table (dicts) two convert
from one dictionary to the other
KEGGlist(db, organism='', **kwargs) -> dict
return all the element of a specific database for a certain organism,
in the form of a dictionary element: description
KEGGget(element, option='', **kwargs) -> dict
return the dictionary of description of the required object.
possible options are: aaseq | ntseq | mol | kcf | image | kgml
KEGGbrite(britename, option='', **kwargs) -> dict of dicts
analize a brite ontology and return a dictionary of dictionaries.
still in beta version, works up to three level of hierarchy.
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.