kingfisher

Download/extract biological FASTA/Q read data and metadata

Project description

Welcome

Kingfisher is a fast and flexible program for procurement of sequence files (and their annotations) from public data sources, including the European Nucleotide Archive (ENA), NCBI SRA, Amazon AWS and Google Cloud. It's input is one or more "Run" accessions e.g. DRR001970, or a BioProject accessions e.g. PRJNA621514 or SRP260223.

For more documentation, see https://wwood.github.io/kingfisher-download/

Project details

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0.4.1

Jan 17, 2024

0.4.0

Jan 17, 2024

0.3.1

Sep 27, 2023

0.3.0

Sep 20, 2023

0.2.2

Aug 8, 2023

This version

0.2.1

May 24, 2023

0.2.0

May 23, 2023

0.1.2

Dec 19, 2022

0.1.1

Dec 19, 2022

0.1.0

Dec 2, 2022

0.0.2

Dec 2, 2022

0.0.1.dev0 pre-release

Jul 6, 2021

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kingfisher-0.2.1.tar.gz (38.1 kB view hashes)

Uploaded May 24, 2023 Source

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Uploaded May 24, 2023 Python 3

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