korsair 1.0.5

korsair pythonlib release

# Korsair

### Project description

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### Install and Import

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Install with pip

`jsx python3 -m pip install korsair `

Import korsair

`python import korsair `

### Functions

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• get_variant(chro, pos, ref, alt)

• get_variant_id(rsid)

• get_gene_v1(gene_id)

• get_gene_v2(gene_id)

• get_region_v1(chro, start, end)

• get_region_v2(chro, start, end)

### Simple Example

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`python Gene Symbol: TP53 Variant format: 7-140787574-C-T dbSNP: rs397507456, Region: 17-7676272-7675994 Ensembl Gene: ENSG00000133703 Ensembl Transcript: ENST00000311936 `

1. get_variant

   `python korsair.get_vaiant('chr7', 140787574, 'C', 'T') `

2. get_variant_id

   `python korsair.get.get_variant_id('rs397507456') `

3. get_gene_v1

   `python korsair.get_gene_v1('CHD8') `

4. get_gene_v2

   `python korsair.get_gene_v2('CHD8') `

5. get_region_v1

   `python korsair.get_region_v1(17, 7676272, 7675994) `

6. get_region_v2

   `python korsair.get_region_v2(17, 7676272, 7675994) `

### Site

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[KORSAIR](http://korsair.kisti.re.kr/)