kronos-pipeliner 2.0.4

A workflow assembler for genome analytics and informatics

kronos is a software tool for automating reproducible, auditable and distributable bioinformatics workflow development. It obviates explicit coding for workflow development to a great extent by compiling a text configuration file into an executable Python scripts.

Dependencies

• ruffus == 2.4.1

• PyYaml >= 3.11

Optional Python Libraries

For running on a cluster using drmaa, i.e. using -b drmaa, you will need to install:

• drmaa-python == 0.7.6

Documentation

Please refer to kronos online documentation.

Contact

email: Jafar Taghiyar <[e-mail]>

Please report issues in our kronos google group.

Change log

2.0.4:

• removed the limitation on the number of simultaneous jobs/pipelines.

• added --no_prefix back to the input options of run command.

• minor bug fixes.

2.0.3:

First version released!