Python library for plotting Cellphonedb results. Ported from ktplots R package.

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  • License: MIT License (MIT)
  • Author: Kelvin Tuong
  • Tags cellphonedb, cpdb, plot_cpdb, ktplots, ligand-receptor, interaction
  • Requires: Python <4.0, >=3.8
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ktplots-py

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Welcome! This is a super light-weight python library for plotting CellphoneDB results. Ported from ktplots R package. For more options, please check out the original R package.

The documentation is here.

Installation

pip install ktplotspy

Support

Support is provided on a voluntary basis, as time permits.

If there are any ideas, comments, suggestions, thing you would like to know more etc., please feel free to email me at z.tuong@uq.edu.au or post in the issue tracker and I will get back to you.

Citation

If you find this useful, please cite the following preprint:

[Troule2023]

Troulé K, Petryszak R, Prete M, Cranley J, Harasty A, Tuong ZK, Teichmann SA, Garcia-Alonso L, Vento-Tormo R. (2023) CellPhoneDB v5: inferring cell-cell communication from single-cell multiomics data., arXiv. preprint arXiv:2311.04567. 2023 Nov 8.

as well, as github repositories. Also leave a star at the ktplotspy and the original ktplots repositories!

Project details

Verified details  (What is this?)

These details have been verified by PyPI
Maintainers
Avatar for kt16 from gravatar.com kt16

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: MIT License (MIT)
  • Author: Kelvin Tuong
  • Tags cellphonedb, cpdb, plot_cpdb, ktplots, ligand-receptor, interaction
  • Requires: Python <4.0, >=3.8
Classifiers

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