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Python library for manipulating infinite trees.

Project description

Lazy Tree

Build Status codecov PyPI version License: MIT

Table of Contents

Installation

If you just need to use lazytree, you can just run:

$ pip install lazytree

For developers, note that this project uses the poetry python package/dependency management tool. Please familarize yourself with it and then run:

$ poetry install

Usage

A LazyTree is a triple, (root, child_map, view) where root : A and a child map, child_map, which maps a to a (finite) list of children child_map : A -> List[A] define the tree's structure and view : A -> B defines what the tree represents. The default view is the identity map, lambda x: x.

This structure is useful for modeling infinite (or really large) trees where only a finite number of nodes need to be accessed. For example, the following Binary tree represents the recursive subdivision of the interval [0, 1].

from lazytree import LazyTree

def split(itvl):
    lo, hi = itvl
    mid = lo + (hi - lo)/2
    return (lo, mid), (mid, hi)

tree = LazyTree(
    root=(0, 1),  # Initial Itvl
    child_map=split  # Itvl -> [Itvl]
)

Conceptually a LazyTree object can be thought of as containing the pieces of data.

  1. The root of the tree.
  2. The data represented by the root, accessed via the view method.
  3. The child subtrees - computed using child_map and accessed through the .children attribute.

For example, in our interval example, each node corresponds to an interval of (0, 1) and has two child subtrees.

# View the current root.
assert tree.view() == tree.root

subtrees = tree.children
assert len(subtrees) == 2

Often, for each node in a tree, one is interested in computing a particular function. This can be done using the map and view methods. For example, below map each interval in the tree to it's size. This results in a new LazyTree object.

tree2 = tree.map(lambda itvl: itvl[1] - itvl[0])  # Change view to itvl size.
assert tree2.view() == 1

# Access the root's subtrees
subtrees = tree2.children
assert len(subtrees) == 2
assert subtrees[0].root == (0, 0.5)
assert subtrees[0].view() == 0.5

Travesals of a LazyTree object are also implemented. For example,

# Breadth First Search through tree.
## Note: calls .view() before returning. 
itvls = tree.bfs()  # returns a generator.
sizes = tree2.bfs()  # returns a generator.

assert next(itvls) == (0, 1)
assert next(sizes) == 1

assert next(itvls) == (0, 0.5)
assert next(sizes) == 0.5

assert next(itvls) == (0.5, 1)
assert next(sizes) == 0.5

# Cost guided traversal.
## Note: Smaller means higher priority.
sizes = tree2.cost_guided_refinement(cost=lambda x: x)
assert next(sizes)  == 1  # (0, 1)
assert next(sizes)  == 0.5  # (0, 0.5)
assert next(sizes)  == 0.25  # (0, 0.25)

# Iterative Deepening Depth First Traversal
sizes = tree2.iddfs(max_depth=3)  # returns a generator.
assert list(sizes) == [1, 0.5, 0.5, 0.25, 0.25, 0.25, 0.25, 0.125, 0.125, 0.125, 0.125, 0.125, 0.125, 0.125, 0.125]

# Note, you can reset the current view.
tree3 = tree2.with_identity_view()
assert tree3.view() == tree.view()

Finally, one can "prune" away subtrees by labeling them as leaf nodes using the prune method. If you are sure that the resulting tree is finite (either due to pruning or the provided child_map) then one can compute the leaves of the tree.

# Prune subtrees with a root of size less than 0.1.
tree4 = tree2.prune(isleaf=lambda s: s < 0.2)
sizes = tree.bfs()
assert all(s > 0.001 for s in sizes)  # Note that sizes is now finite.



# Compute leafs of tree. Careful! Could be infinite!
assert all(s == 0.125 for s in tree4.leaves())
assert len(list(tree4.leaves())) == 8

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