libact 0.1.3b0

Pool-based active learning in Python

# libact: Pool-based Active Learning in Python

authors: Yu-An Chung, Shao-Chuan Lee, Yao-Yuan Yang, Tung-En Wu, [Hsuan-Tien Lin](http://www.csie.ntu.edu.tw/~htlin)

[](https://travis-ci.org/ntucllab/libact)
[](http://libact.readthedocs.org/en/latest/?badge=latest)
[](https://badge.fury.io/py/libact)
[](https://codecov.io/github/ntucllab/libact?branch=master)
[](http://starveller.sigsev.io/ntucllab/libact)

# Introduction

`libact` is a Python package designed to make active learning easier for
real-world users. The package not only implements several popular active learning strategies, but also features the [active-learning-by-learning](http://www.csie.ntu.edu.tw/~htlin/paper/doc/aaai15albl.pdf)
meta-algorithm that assists the users to automatically select the best strategy
on the fly. Furthermore, the package provides a unified interface for implementing more strategies, models and application-specific labelers. The package is open-source along with issue trackers on github, and can be easily installed from Python Package Index repository.

Documentation for the latest release is hosted [here](http://libact.readthedocs.org/en/latest/).
Comments and questions on the package is welcomed at `[e-mail]`. If you find this package useful, please cite the original works (see Reference of each strategy) as well as (temporarily)

```
@TechReport{libact,
author = {Yao-Yuan Yang and Yu-An Chung and Shao-Chuan Lee and Tung-En Wu and Hsuan-Tien Lin},
title = {libact: Pool-based Active Learning in Python},
url = {https://github.com/ntucllab/libact},
year = {2015}
}
```

# Basic Dependencies

* Python 2.7, 3.3, 3.4, 3.5

* Python dependencies
```
pip install -r requirements.txt
```

* Debian (>= 7) / Ubuntu (>= 14.04)
```
sudo apt-get install build-essential gfortran libatlas-base-dev liblapacke-dev python3-dev
```

* macOS
```
brew install homebrew/science/openblas
```

# Installation

After resolving the dependencies, you may install the package via pip (for all users):
```
sudo pip install libact
```

or pip install in home directory:
```
pip install --user libact
```

or pip install from github repository for latest source:
```
pip install git+https://github.com/ntucllab/libact.git
```

To build and install from souce in your home directory:
```
python setup.py install --user
```

To build and install from souce for all users on Unix/Linux:
```
python setup.py build
sudo python setup.py install
```

# Usage

The main usage of `libact` is as follows:

```python
qs = UncertaintySampling(trn_ds, method='lc') # query strategy instance

ask_id = qs.make_query() # let the specified query strategy suggest a data to query
X, y = zip(*trn_ds.data)
lb = lbr.label(X[ask_id]) # query the label of unlabeled data from labeler instance
trn_ds.update(ask_id, lb) # update the dataset with newly queried data
```

Some examples are available under the `examples` directory. Before running, use
`examples/get_dataset.py` to retrieve the dataset used by the examples.

Available examples:

- [plot](examples/plot.py) : This example performs basic usage of libact. It splits
a fully-labeled dataset and remove some label from dataset to simulate
the pool-based active learning scenario. Each query of an unlabeled dataset is then equivalent to revealing one labeled example in the original data set.
- [label_digits](examples/label_digits.py) : This example shows how to use libact in the case
that you want a human to label the selected sample for your algorithm.
- [albl_plot](examples/albl_plot.py): This example compares the performance of ALBL
with other active learning algorithms.
- [multilabel_plot](examples/multilabel_plot.py): This example compares the performance of
algorithms under multilabel setting.
- [alce_plot](examples/alce_plot.py): This example compares the performance of
algorithms under cost-sensitive multi-class setting.

# Running tests

To run the test suite:

```
python setup.py test
```

To run pylint, install pylint through ```pip install pylint``` and run the following command in root directory:

```
pylint libact
```

To measure the test code coverage, install coverage through ```pip install coverage``` and run the following commands in root directory:

```
coverage run --source libact --omit */tests/* setup.py test
coverage report
```

# Acknowledgments

The authors thank Chih-Wei Chang and other members of the [Computational Learning Lab](https://learner.csie.ntu.edu.tw/) at National Taiwan University for valuable discussions and various contributions to making this package better.