TCR language modelling library using Pytorch.

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  • License: MIT License
  • Author: Yuta Nagano
  • Maintainer: Yuta Nagano
  • Tags TCR, TR, T cell, transformer, bert, MLM, immunology, bioinformatics
  • Requires: Python >=3.9
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Project description

libtcrlm

This is the TCR language modelling library that powers SCEPTR. It is a thin layer around PyTorch with some extra infrastructure. Note that this repository only contains library code- for a readily-usable deployment of SCEPTR, or code used to train the models, please see the links below.

Related links

[!NOTE] The repositories below are not yet public, but will be opened up in the coming days along when the SCEPTR publication is also made public. Please stay tuned!

Link Description
https://github.com/yutanagano/sceptr Readily usable deployment of SCEPTR
https://github.com/yutanagano/tcrlm Code used for training models

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Avatar for yutanagano from gravatar.com yutanagano

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Project links
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  • License: MIT License
  • Author: Yuta Nagano
  • Maintainer: Yuta Nagano
  • Tags TCR, TR, T cell, transformer, bert, MLM, immunology, bioinformatics
  • Requires: Python >=3.9
Classifiers

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1.0.0

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