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A flexible and fast mixed model toolbox written in C++/python

Project description

LIMIX

What is Limix?

Limix is a flexible and efficient linear mixed model library with interfaces to Python and other scripting languages.

Authors:

Oliver Stegle (stegle@ebi.ac.uk) Christoph Lippert (lippert@microsoft.com) Franceso Paolo Casale (casale@ebi.ac.uk)

Installation:

Recommended is an installation via pypi.

pip install limix will work on most systems.

If you want to install LIMIX from source you require: Python: - socns, scipy, numpy

Swig: - swig 2.0 or higher

How to use LIMIX? A good starting point is our package Vignettes. These tutorials are freely available in this repository: https://github.com/PMBio/limix-tutorials.

The main package vignette can also be viewed using the ipython notebook viewer: http://nbviewer.ipython.org/github/pmbio/limix-tutorials/blob/master/demo_yeast.ipynb

Project details


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Filename, size & hash SHA256 hash help File type Python version Upload date
limix-0.5.3.tar.gz (5.5 MB) Copy SHA256 hash SHA256 Source None May 9, 2014

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