A flexible and fast mixed model toolbox written in C++/python
Project description
LIMIX
What is Limix?
Limix is a flexible and efficient linear mixed model library with interfaces to Python and other scripting languages.
Authors:
Oliver Stegle (stegle@ebi.ac.uk) Christoph Lippert (lippert@microsoft.com) Franceso Paolo Casale (casale@ebi.ac.uk)
Installation:
Recommended is an installation via pypi.
pip install limix will work on most systems.
If you want to install LIMIX from source you require: Python: - socns, scipy, numpy
Swig: - swig 2.0 or higher
How to use LIMIX? A good starting point is our package Vignettes. These tutorials are freely available in this repository: https://github.com/PMBio/limix-tutorials.
The main package vignette can also be viewed using the ipython notebook viewer: http://nbviewer.ipython.org/github/pmbio/limix-tutorials/blob/master/demo_yeast.ipynb
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