A statistical tool to quantify isoform-specific expression using long-read RNA-seq
Project description
Long-read Isoform Quantification and Analysis
A statistical tool to quantify isoform-specific expression using long-read RNA-seq
Computational pipeline of LIQA
Inputs of LIQA
The input of LIQA is long-read RNA-seq read data in BAM format together with a refrence isoform annotation file.
Installation
Please refer to Installation for how to install LIQA.
Usage
Please refere to Usage for how to use LIQA.
Contact
If you have any questions/issues/bugs, please post them on GitHub. They would also be helpful to other users.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
Built Distribution
Filter files by name, interpreter, ABI, and platform.
If you're not sure about the file name format, learn more about wheel file names.
Copy a direct link to the current filters
File details
Details for the file liqa-1.1.5.tar.gz.
File metadata
- Download URL: liqa-1.1.5.tar.gz
- Upload date:
- Size: 9.0 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.3.0 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/3.7.3
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
e72ac748006d0140d5f0350bd4effcab30760b1bcbafb9e42e12f83f67316b1b
|
|
| MD5 |
a038c930bb6a137d591d83219c3c1ef1
|
|
| BLAKE2b-256 |
c521f33eebccc424188973888301874816b2119dd2ba42821ef0fd7e92e23874
|
File details
Details for the file liqa-1.1.5-py3-none-any.whl.
File metadata
- Download URL: liqa-1.1.5-py3-none-any.whl
- Upload date:
- Size: 10.5 kB
- Tags: Python 3
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/3.3.0 pkginfo/1.5.0.1 requests/2.21.0 setuptools/40.8.0 requests-toolbelt/0.9.1 tqdm/4.31.1 CPython/3.7.3
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
ed8d3b8a7ee2c72fa2e0d1192f4101eea5d87087c30261cc0d09f88d027a8a46
|
|
| MD5 |
b490206cce295c04c26f409b6542f703
|
|
| BLAKE2b-256 |
6d3f2df38bb16800f64de8642af03d88bc36d49f0387bea8f10069f3832593bf
|
