A template project with packages
Project description
A minimalistic parser for sequence alignments (fasta or stockholm formats).
The parser returns an iterator over the alignment records as (identifier, sequence) tuples.
Usage example:
>>> import lilbio
>>> parsed_records = lilbio.parse('alignment.fa', 'fasta')
Built over modified low-level parsers from Biopython (SimpleFastaParser function and StockholmIterator class).
Changes
0.8 (2019-05-27)
Python3 only (>= 3.4)
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