A Python plugin for OMERO.web on Athena
Project description
OMERO.iviewer
An OMERO.web app for visualizing images in OMERO.
Requirements
- OMERO 5.6.0 or newer.
Installing from PyPI
This section assumes that an OMERO.web is already installed.
Install the app using pip:
$ pip install -U omero-iviewer
Add iviewer custom app to your installed web apps:
$ omero config append omero.web.apps '"omero_iviewer"'
To replace the default omero.web viewer:
$ omero config set omero.web.viewer.view omero_iviewer.views.index
To enable the “open with” feature:
$ omero config append omero.web.open_with '["omero_iviewer", "omero_iviewer_index", {"supported_objects":["images", "dataset", "well"], "script_url": "omero_iviewer/openwith.js", "label": "OMERO.iviewer"}]'
Now restart OMERO.web as normal.
Usage
A guide to using OMERO.iviewer can be found on https://omero-guides.readthedocs.io/en/latest/iviewer/docs/iviewer.html
License
OMERO.iviewer is released under the AGPL.
Copyright
2017-2022, The Open Microscopy Environment
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