A pipeline submission engine that parses sample inputs and submits pipelines for each sample.

Navigation

Verified details

These details have been verified by PyPI
Maintainers
Avatar for databio from gravatar.com databio Avatar for donaldcampbelljr from gravatar.com donaldcampbelljr Avatar for michalstolarczyk from gravatar.com michalstolarczyk Avatar for nsheff from gravatar.com nsheff

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: BSD License (BSD2)
  • Author: Nathan Sheffield, Vince Reuter, Michal Stolarczyk, Johanna Klughammer, Andre Rendeiro
  • Tags bioinformatics, sequencing, ngs
Classifiers

Project description

looper logo

Run pytests PEP compatible Code style: black

Looper is a pipeline submission engine. The typical use case is to run a bioinformatics pipeline across many different input samples. Instructions are in the documentation.

Project details

Verified details

These details have been verified by PyPI
Maintainers
Avatar for databio from gravatar.com databio Avatar for donaldcampbelljr from gravatar.com donaldcampbelljr Avatar for michalstolarczyk from gravatar.com michalstolarczyk Avatar for nsheff from gravatar.com nsheff

Unverified details

These details have not been verified by PyPI
Project links
Meta
  • License: BSD License (BSD2)
  • Author: Nathan Sheffield, Vince Reuter, Michal Stolarczyk, Johanna Klughammer, Andre Rendeiro
  • Tags bioinformatics, sequencing, ngs
Classifiers

Release history Release notifications | RSS feed

2.0.0a2 pre-release

2.0.0a1 pre-release

1.9.1

1.9.0

This version

1.8.1

1.8.0 yanked

Reason this release was yanked:

Accidentally released a pre-release version for 1.8.0

1.7.1

1.7.0

1.7.0a1 pre-release

1.6.0

1.6.0a3 pre-release

1.6.0a2 pre-release

1.6.0a1 pre-release

1.5.1

1.5.0

1.4.3

1.4.2

1.4.1

1.4.0

1.3.2

1.3.1

1.3.0

1.2.1

1.2.0

1.1

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

looper-1.8.1.tar.gz (96.2 kB view hashes)

Uploaded Source

Built Distribution

looper-1.8.1-py3-none-any.whl (110.3 kB view hashes)

Uploaded Python 3

Supported by

AWS AWS Cloud computing and Security Sponsor Datadog Datadog Monitoring Fastly Fastly CDN Google Google Download Analytics Microsoft Microsoft PSF Sponsor Pingdom Pingdom Monitoring Sentry Sentry Error logging StatusPage StatusPage Status page