A function package for bioinfomatics
Project description
A lot of functions for bioinfomatics.
For example
Ddict Mulitiple dimension Hash
Fastq_check Fastq Read
Block_Reading A function for block Reading
Ddict Example
from lpp import Ddict
new_hash = Ddict()
new_hash[3][4]=""
new_hash[4][8] = ""
for key in new_hash:
for key2 in new_has[key]:
print( key1,key2 )
Fastq_check Example
from lpp import Fastq_check
DATA= Fastq_check( open("read1.fastq",'rU') )
for a,b,c,b in DATA:
print(a,b,c,d)
For example
Ddict Mulitiple dimension Hash
Fastq_check Fastq Read
Block_Reading A function for block Reading
Ddict Example
from lpp import Ddict
new_hash = Ddict()
new_hash[3][4]=""
new_hash[4][8] = ""
for key in new_hash:
for key2 in new_has[key]:
print( key1,key2 )
Fastq_check Example
from lpp import Fastq_check
DATA= Fastq_check( open("read1.fastq",'rU') )
for a,b,c,b in DATA:
print(a,b,c,d)
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