Helper functions for luciferase data
Project description
luciferase
Helper functions and scripts for luciferase data
Installation
pip3 install luciferase
Examples
A script called reporter-barplot
for creating bar plots from JSON-formatted data is included. After installing luciferase
, you can use it like this:
reporter-barplot --title "plot title" example.json example.pdf
See also the help message:
reporter-barplot -h
Examples of luciferase reporter data in JSON format:
{
"Non-risk, Fwd": [8.354, 12.725, 8.506],
"Risk, Fwd": [5.078, 5.038, 5.661],
"Non-risk, Rev": [9.564, 9.692, 12.622],
"Risk, Rev": [10.777, 11.389, 10.598],
"Empty": [1.042, 0.92, 1.042]
}
{
"Alt, MIN6": [5.47, 7.17, 6.15],
"Ref, MIN6": [3.16, 3.04, 4.34],
"Empty, MIN6": [1.07, 0.83, 0.76],
"Alt, ALPHA-TC6": [2.50, 3.47, 3.33],
"Ref, ALPHA-TC6": [2.01, 1.96, 2.31],
"Empty, ALPHA-TC6": [1.042, 0.92, 1.042]
}
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