Skip to main content

Magnetosome gene cluster annotation, screening and mapping tool

Project description

magcluster

Magnetosome gene cluster annotation, screening and mapping tool

Installation

Run the following to install: pip install magcluster

General Usage

Magnetosome gene annotation:
$ magcluster maga XXX.fa

Magnetosome gene screen:
$ magcluster magsc XXX.faa XXX.gbk

Magnetosome gene cluster mapping:
$ magcluster magm XXX_screened.gbk

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

magcluster-0.0.1.tar.gz (6.5 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

magcluster-0.0.1-py3-none-any.whl (19.0 kB view details)

Uploaded Python 3

File details

Details for the file magcluster-0.0.1.tar.gz.

File metadata

  • Download URL: magcluster-0.0.1.tar.gz
  • Upload date:
  • Size: 6.5 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.24.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.8.5

File hashes

Hashes for magcluster-0.0.1.tar.gz
Algorithm Hash digest
SHA256 7b181389916cd0d101d09db49e13996ebc447e8c5400b4cfe80b962d2b03e95b
MD5 6b30c223c82dc6cfdd254578e69a02b2
BLAKE2b-256 3f3ab44418adb135fc87cf2005125b23362fa9375231c2395bb6cba5a49d7769

See more details on using hashes here.

File details

Details for the file magcluster-0.0.1-py3-none-any.whl.

File metadata

  • Download URL: magcluster-0.0.1-py3-none-any.whl
  • Upload date:
  • Size: 19.0 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.24.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.8.5

File hashes

Hashes for magcluster-0.0.1-py3-none-any.whl
Algorithm Hash digest
SHA256 0c3c0096fc8288b4c305bc0d34dded95af6c8f45e623ea34e5ccec00ec06fabf
MD5 9e236a4c82f4d88855599b7cf99d6793
BLAKE2b-256 9618fe07cbe53a516d12eb76ad4c000d1fcd395578ea6e214a678c7a4076bdaf

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page