Skip to main content

Magnetosome gene cluster annotation, screening and mapping tool

Project description

magcluster

Magnetosome gene cluster annotation, screening and mapping tool

Installation

Run the following to install: pip install magcluster

General Usage

Magnetosome gene annotation:
$ magcluster maga XXX.fa

Magnetosome gene screen:
$ magcluster magsc XXX.faa XXX.gbk

Magnetosome gene cluster mapping:
$ magcluster magm XXX_screened.gbk

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

magcluster-0.0.3.tar.gz (19.6 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

magcluster-0.0.3-py3-none-any.whl (20.5 kB view details)

Uploaded Python 3

File details

Details for the file magcluster-0.0.3.tar.gz.

File metadata

  • Download URL: magcluster-0.0.3.tar.gz
  • Upload date:
  • Size: 19.6 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.24.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.8.5

File hashes

Hashes for magcluster-0.0.3.tar.gz
Algorithm Hash digest
SHA256 338750501c5fd8d064a125302b656aa9fd1dd8b080f74f3f17677641427cc4a9
MD5 8626af16863edfa5e38169246a043099
BLAKE2b-256 6540f012eb86c601ed877289e8298ed79e4f0bf6009025026640ce1cf24b7ce6

See more details on using hashes here.

File details

Details for the file magcluster-0.0.3-py3-none-any.whl.

File metadata

  • Download URL: magcluster-0.0.3-py3-none-any.whl
  • Upload date:
  • Size: 20.5 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.24.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.8.5

File hashes

Hashes for magcluster-0.0.3-py3-none-any.whl
Algorithm Hash digest
SHA256 98d0ad2c9a1be6e788ed81816dafd6d32960116735d143c22bc99b445e24b89b
MD5 e0f0f208ba08c93007bf6bcfb238dc90
BLAKE2b-256 fc1e22b0cb40e880b767619c96678a5079dcffa6c4c96f755793126c6beece37

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page