Skip to main content

Magnetosome gene cluster annotation, screening and mapping tool

Project description

magcluster

Magnetosome gene cluster annotation, screening and mapping tool

Installation

Run the following to install: pip install magcluster

General Usage

Magnetosome gene annotation:
$ magcluster maga XXX.fa

Magnetosome gene screen:
$ magcluster magsc XXX.faa XXX.gbk

Magnetosome gene cluster mapping:
$ magcluster magm XXX_screened.gbk

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

magcluster-0.0.5.tar.gz (19.6 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

magcluster-0.0.5-py3-none-any.whl (26.9 kB view details)

Uploaded Python 3

File details

Details for the file magcluster-0.0.5.tar.gz.

File metadata

  • Download URL: magcluster-0.0.5.tar.gz
  • Upload date:
  • Size: 19.6 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.24.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.8.5

File hashes

Hashes for magcluster-0.0.5.tar.gz
Algorithm Hash digest
SHA256 18a39e0bc9139c90cd41370d61014139aa251bc82fc1023e7a837dbab1d419ac
MD5 aaffd9e423ee6e04185b7532d69413f6
BLAKE2b-256 9446c9a5c0689bdea6f13a6e666bf49204aea703bec9a4eb78fedd0b72d09c9a

See more details on using hashes here.

File details

Details for the file magcluster-0.0.5-py3-none-any.whl.

File metadata

  • Download URL: magcluster-0.0.5-py3-none-any.whl
  • Upload date:
  • Size: 26.9 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.24.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.8.5

File hashes

Hashes for magcluster-0.0.5-py3-none-any.whl
Algorithm Hash digest
SHA256 61360a863f0cafb88a8264152c7e345963f843e1822a38c38d9170dda1ae124c
MD5 e7a1c8053299073fea3b762ad51025c9
BLAKE2b-256 30719d2437b71a7ca6c277b24587d3b769148a9316e5dc8c318645bd28571a43

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page