Skip to main content

Magnetosome gene cluster annotation, screening and mapping tool

Project description

magcluster

Magnetosome gene cluster annotation, screening and mapping tool

Installation

Run the following to install: pip install magcluster

General Usage

Magnetosome gene annotation:
$ magcluster maga XXX.fa

Magnetosome gene screen:
$ magcluster magsc XXX.faa XXX.gbk

Magnetosome gene cluster mapping:
$ magcluster magm XXX_screened.gbk

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

magcluster-0.0.7.tar.gz (20.0 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

magcluster-0.0.7-py3-none-any.whl (33.5 kB view details)

Uploaded Python 3

File details

Details for the file magcluster-0.0.7.tar.gz.

File metadata

  • Download URL: magcluster-0.0.7.tar.gz
  • Upload date:
  • Size: 20.0 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.24.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.8.5

File hashes

Hashes for magcluster-0.0.7.tar.gz
Algorithm Hash digest
SHA256 4243893d9e54f6106a63c6108ccc806fe6cafa13c5b7ba7cbfcb4c0a9050e506
MD5 98b6b693ab64b49c85d44024a5983291
BLAKE2b-256 adcf24cbc6ecf608822b639579e9307d0f78d8d2723a028c7f1bb01d40aac75c

See more details on using hashes here.

File details

Details for the file magcluster-0.0.7-py3-none-any.whl.

File metadata

  • Download URL: magcluster-0.0.7-py3-none-any.whl
  • Upload date:
  • Size: 33.5 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.24.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.8.5

File hashes

Hashes for magcluster-0.0.7-py3-none-any.whl
Algorithm Hash digest
SHA256 c3fdb5332801e6bc9900a7d709775ab1c03c708a75ad3a16bc90025dccf47601
MD5 5316303e980013dc35f6c2b23bf43f21
BLAKE2b-256 ab4ca307e2501e5077c63df566a7e0e45177a4697cc0f501da7bae7b47ed5ed4

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page