Skip to main content

Magnetosome gene cluster annotation, screening and mapping tool

Project description

magcluster

Magnetosome gene cluster annotation, screening and mapping tool

Installation

Run the following to install: pip install magcluster

General Usage

Magnetosome gene annotation:
$ magcluster maga XXX.fa

Magnetosome gene screen:
$ magcluster magsc XXX.faa XXX.gbk

Magnetosome gene cluster mapping:
$ magcluster magm XXX_screened.gbk

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

magcluster-0.0.9.tar.gz (20.5 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

magcluster-0.0.9-py3-none-any.whl (34.2 kB view details)

Uploaded Python 3

File details

Details for the file magcluster-0.0.9.tar.gz.

File metadata

  • Download URL: magcluster-0.0.9.tar.gz
  • Upload date:
  • Size: 20.5 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.24.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.8.5

File hashes

Hashes for magcluster-0.0.9.tar.gz
Algorithm Hash digest
SHA256 6c2180361cd1d6f9ab9a91114828ae055568b7ee48f895b27b549c32ae323063
MD5 8c1d91b85df30b5430c3345b8f958f84
BLAKE2b-256 feb49673ccb18942559faa127f5ff1a049efc20c23ae94e9d9cb889daeb92047

See more details on using hashes here.

File details

Details for the file magcluster-0.0.9-py3-none-any.whl.

File metadata

  • Download URL: magcluster-0.0.9-py3-none-any.whl
  • Upload date:
  • Size: 34.2 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.0.1 pkginfo/1.7.0 requests/2.24.0 requests-toolbelt/0.9.1 tqdm/4.51.0 CPython/3.8.5

File hashes

Hashes for magcluster-0.0.9-py3-none-any.whl
Algorithm Hash digest
SHA256 8d6f3584602389df592a1b1ab005bda80aefb9dda549052f030562e6bf47bdae
MD5 5c1f0c778748842976496049ade7d653
BLAKE2b-256 f6d1c155020ed235c9d1f3ffcd2f33a49643aaa3f1bce9770977574493aacb25

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page