Skip to main content

Magnetosome gene cluster annotation, screening and mapping tool

Project description

magcluster

Magnetosome gene cluster annotation, screening and mapping tool

Installation

Run the following to install: pip install magcluster

General Usage

Magnetosome gene annotation:
$ magcluster maga XXX.fa

Magnetosome gene screen:
$ magcluster magsc XXX.faa XXX.gbk

Magnetosome gene cluster mapping:
$ magcluster magm XXX_screened.gbk

Project details


Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Source Distribution

magcluster-0.1.2.tar.gz (20.0 kB view details)

Uploaded Source

Built Distribution

If you're not sure about the file name format, learn more about wheel file names.

magcluster-0.1.2-py3-none-any.whl (21.2 kB view details)

Uploaded Python 3

File details

Details for the file magcluster-0.1.2.tar.gz.

File metadata

  • Download URL: magcluster-0.1.2.tar.gz
  • Upload date:
  • Size: 20.0 kB
  • Tags: Source
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.6.1 pkginfo/1.7.1 requests/2.25.0 requests-toolbelt/0.9.1 tqdm/4.54.1 CPython/3.9.1

File hashes

Hashes for magcluster-0.1.2.tar.gz
Algorithm Hash digest
SHA256 612eae8558af4daa71debeb884b020da91ccd6ffc7aa8a948cf6611b2b78b654
MD5 9edb55b2506a156717d789088c41a1c3
BLAKE2b-256 a6659e0ee25f86a5fea45d453bf722526042ed46cb6b75609fb4d1f948edc2aa

See more details on using hashes here.

File details

Details for the file magcluster-0.1.2-py3-none-any.whl.

File metadata

  • Download URL: magcluster-0.1.2-py3-none-any.whl
  • Upload date:
  • Size: 21.2 kB
  • Tags: Python 3
  • Uploaded using Trusted Publishing? No
  • Uploaded via: twine/3.4.1 importlib_metadata/4.6.1 pkginfo/1.7.1 requests/2.25.0 requests-toolbelt/0.9.1 tqdm/4.54.1 CPython/3.9.1

File hashes

Hashes for magcluster-0.1.2-py3-none-any.whl
Algorithm Hash digest
SHA256 892b4a99fe5d722cce4b7510fc9ff4245482b35e9d38a2f4ae7587c585c4c886
MD5 6f5fb9e31bd241cd23a431b7e0af796c
BLAKE2b-256 594be08e4837160ec41b9408a9584056caefe0a30431802adde9a3115275b346

See more details on using hashes here.

Supported by

AWS Cloud computing and Security Sponsor Datadog Monitoring Depot Continuous Integration Fastly CDN Google Download Analytics Pingdom Monitoring Sentry Error logging StatusPage Status page