Convert raw text data files into a single excel file.
Project description
A plugin based data load and manimupulation library.
Installation
Use pip like:
$ pip install maidenhair
Usage
Assume that there are three kinds of samples and each samples have 5 indipendent experimental results. All filenames are written as the following format:
sample-type<type number>.<experiment number>.txt
And files are saved in data directory like:
+- data | +- sample-type1.001.txt +- sample-type1.002.txt +- sample-type1.003.txt +- sample-type1.004.txt +- sample-type1.005.txt +- sample-type2.001.txt +- sample-type2.002.txt +- sample-type2.003.txt +- sample-type2.004.txt +- sample-type2.005.txt +- sample-type3.001.txt +- sample-type3.002.txt +- sample-type3.003.txt +- sample-type3.004.txt +- sample-type3.005.txt
Then, the code for plotting the data will be:
>>> import matplotlib.pyplot as plt >>> import maidenhair >>> import maidenhair.statistics >>> dataset = [] >>> dataset += maidenhair.load('data/sample-type1.*.txt', unite=True) >>> dataset += maidenhair.load('data/sample-type2.*.txt', unite=True) >>> dataset += maidenhair.load('data/sample-type3.*.txt', unite=True) >>> nameset = ['Type1', 'Type2', 'Type3'] >>> for name, (x, y) in zip(nameset, dataset): ... xa = maidenhair.statistics.average(x) ... ya = maidenhair.statistics.average(y) ... ye = maidenhair.statistics.confidential_interval(y) ... plt.errorbar(xa, ya, yerr=ye, label=name) ... >>> plt.show()
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