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Mass spectrometry query language python implementation

Project description

MASS Query Languge

Unit Testing NF Workflow Testing

This is the repository to define the language and reference implementation. This contains several parts

  1. Language Grammar
  2. Reference Implementation Python API
  3. Commandline Utility to execute
  4. NextFlow Workflow For Large Scale Analysis
  5. ProteoSAFe workflow
  6. Dash interactive exploration

Developers/Contact

Mingxun Wang is the main creator and developer of MSQL. Contact me for contributing or using it!

Docs

Here

Python API

Here is the most basic operation you can do



Web API

/api /parse

/visualize/ms1

Example Link

/visualize/ms2

License

MIT License

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