Module for selecting polygonal ROIs on images, spline fitting and ROI expansion
Project description
matplotlib-polyroi
Module for selecting polygonal ROIs on images, spline fitting and ROI expansion
Instructions
As a first step, I would recommend checking out the tutorial notebook. This can be run in the cloud using Binder (please note that it may take several minutes to open the notebook):
To run locally, download the code and install the relevant requirements (requirements.txt) in a virtual environment.
Installation
To explore further and incorporate into your own analysis pipelines, you can install the package from PyPI using pip:
pip install matplotlib-polyroi
If you want to make changes to the code you can download/clone this folder, navigate to it, and run:
pip install -e .[dev]
License
This work is licensed under a Creative Commons Attribution 4.0 International License.
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