State of the art analysis tools for 4D STEM
Project description
mcemtools
Deep unsupervised analysis tools for Four-dimensional Scanning Transmission Electron Microscopy (4D-STEM)
Free software: MIT license
Documentation: https://mcemtools.readthedocs.io.
Features
TODO
Credits
This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.
History
0.1.0 (2022-09-07)
First release on PyPI.
0.2.0 (2023-07-11)
Many functions used for 4D-STEM analysis have been added.
OOP is avoided as much as possible.
0.3.0 (2023-07-11)
Tests are increasing in number
init includes import of mcemtools
0.4.0 (2023-07-11)
Many small bugs are fixed
0.5.0 (2023-07-12)
Added binning to transforms
0.6.0 (2023-07-14)
More tests are added
Names are consistant accross the package.
0.7.0 (2023-07-15)
markimage bug is fixed
0.8.0 (2023-07-19)
markimage bug is fixed really as US version of centre is center.
napari based GUI is added to mcemtools.
bianary files can be read too.
0.8.1 (2023-07-27)
viewer_4D is a lot more concise and bug free.
0.8.2 (2023-07-27)
by pressing i, you get shapes info, m shows the mask and F5 updates the mask.
0.8.3 (2023-07-28)
critical bug was fixed in viewer_4D
0.8.4 (2023-07-28)
critical bug was fixed in viewer_4D
0.8.5 (2023-08-03)
bug fixed in image_by_windows
0.8.6 (2023-08-05)
viewer_4D handles arrows to move the selected objects.
0.8.7 (2023-08-31)
added load_raw and load_dm4.
bug fixed in viewer_4D, moves a lot smoother than before.
viewer_4D shows a single image when size of the mask is 1 pixel, rapidly.
conv_4D added to analysis
0.8.8 (2023-09-04)
critical bug fixed in bin_4D
0.8.9 (2023-09-20)
bug removed from Normalize_4D
bug removed from SymmetrySTEM
tets added to locate atom and …
0.8.10 (2023-09-12)
bug removed from SymmetrySTEM and mirror is added
data_maker_4D can be updated
remove_islands_by_size bug fixed
0.8.11 (2023-09-25)
Bug fixed in viewer_4D
0.9.0 (2023-10-13)
added denoise4net
added clustering4net and feature_maker_4D
0.9.1 (2024-02-23)
added denoise4_tsvd
faster bin_4D
torch handler does not update the model if the loss is inf or nan
0.9.2 (2024-03-23)
annular mask can handle even sized image
0.9.2 (2024-05-02)
viewer_4D takes second mask to subtract
0.9.3 (2024-05-24)
viewer_4D takes second mask to subtract
0.9.4 (2024-06-01)
minimal requirenments and test scripts for denoising is added
first denoising example added
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