spoof SerialEM mdoc files from images collected in Tomography v5 from ThermoFisher
Project description
mdocspoofer
Create dummy SerialEM mdoc files for a set of tomograms collected as dose fractionated movies in Tomo5.
This serves to allow processing of cryo-ET data collected in Tomo5 using Warp.
Installation
Python version 3.6+
pip install mdocspoofer
Usage
From the command line run
mdocspoofer
This will start an interactive command-line interface, provide the path to the folder containing the dose-fractionated micrographs and the applied electron dose per tilt image in electrons per square angstrom.
To run in non-interactive mode, supply options at the command line. Details can be found using
mdocspoofer --help
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Source Distribution
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