measury 1.3.1

A tool to measure pictures with scale_bars

# Measury

 [](https://github.com/ullmannJan/measury/actions/workflows/pytest.yml)


Measury is a measurement tool for microscope images. The goal ist to simplify and accelerate the measurements of structures from images.

## Functionality

<!– Add image of program –> 

### Load Images Supports all image formats supported by `opencv`.

### Automatic Scaling Bar Detection Automatic Detection of Scaling bar. Just select the tool identify scaling and click on the scale bar. Microscope profiles can store locations of scale bar for certain types of microscopes for easier detection.

### Moving/Handling You can move the image by dragging the mouse wheel or by selecting move mode

### Various Measurement Tools There are several Tools available to measure your structures.

• Select (select objects without changing them)

• Line

• Rectangle

  • Square (by pressing Ctrl)

• Ellipse

  • Circle (by pressing Ctrl)

• Angle

## Running

First create an empty miniconda environment

conda create -n measury conda activate measury

Then install the measury package

pip install .

To run Measury simply

python run.py

### Running tests

To run tests you will need to install pytest as well

pip install pytest

Then, simply calling pytest will run the tests

pytest #or python -m pytest

## Compiling

To compile this project it is advised to use `pyinstaller`. > It is important to use Pyinstaller >= 6.0.0

This guides you through all steps that are needed for running it. First, `pyinstaller` should be installed via pip or conda

pip install pyinstaller # or with conda conda install -c conda-forge pyinstaller

Finally, run the compiling script which calls pyinstaller

python compile.py

This will result in a folder `dist` where the compiled project will be placed.

The `compile.py` script has the option to create a compressed .zip file of the project. You can set

zipped = True

to achieve this behavior.