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Metabolic Network Completion. Compute minimal completions to your draft net with reactions from a repair net.

Project description

Installation
============


You can install meneco by running::

$ pip install meneco




Usage
=====

Typical usage is::

$ meneco.py draftnetwork.sbml repairnetwork.sbml seeds.sbml targets.sbml


Samples
=======

Sample files for the reconstruction of ectocarpus are available here:
ectocyc.sbml_ metacyc_16-5.sbml_ seeds.sbml_ targets.sbml_

.. _ectocyc.sbml: http://bioasp.github.io/downloads/samples/ectodata/ectocyc.sbml
.. _metacyc_16-5.sbml: http://bioasp.github.io/downloads/samples/ectodata/metacyc_16-5.sbml
.. _seeds.sbml: http://bioasp.github.io/downloads/samples/ectodata/seeds.sbml
.. _targets.sbml: http://bioasp.github.io/downloads/samples/ectodata/targets.sbml

Project details


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Filename, size & hash SHA256 hash help File type Python version Upload date
meneco-1.4.1.tar.gz (7.5 kB) Copy SHA256 hash SHA256 Source None Mar 6, 2014

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