Merge Stardist Masks
Project description
Features
This new post-processing step allows to use StarDist segmentation on non-star-convex objects.
Instead of NMS, this post-processing naively merges masks together
Masks whos center points lie within another mask are added to that mask
Works in 2D and 3D
In 2D, it works on big and winding objects
Requirements
A StarDist installation.
Installation
You can install Merge StarDist Masks via pip from PyPI:
$ pip install merge-stardist-masksUsage
Please see the EXAMPLE in Usage for details.
Contributing
Contributions are very welcome. To learn more, see the Contributor Guide.
License
Distributed under the terms of the MIT license, Merge StarDist Masks is free and open source software.
Issues
If you encounter any problems, please file an issue along with a detailed description.
Credits
This project was generated from @cjolowicz’s Hypermodern Python Cookiecutter template.
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