Misc functions for metagenomics pipelines
Project description
MetaSnek
Misc functions for metagenomic pipelines
fastq_finder
Return a python dictionary of sample names and fasta/q files from a directory or a TSV file. If given a directory, sample names will be everything upto the first match for "_R1|_R2|_S". Write a TSV file based on your dictionary. More information and examples on here
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