Metagenomics toolkit
Project description
Metagenomics toolkit enables scientists to download all of the sample metadata for a given study to a single csv file.
Install metagenomics toolkit
pip install mg-toolkit
Usage
$ mg-toolkit -h usage: mg-toolkit [-h] [-V] [-d] {original_metadata,sequence_search} ... Metagenomics toolkit -------------------- positional arguments: {original_metadata,sequence_search} original_metadata Download original metadata sequence_search Search sequence optional arguments: -h, --help show this help message and exit -V, --version print version information -d, --debug print debugging information
Example:
$ mg-toolkit original_metadata -a ERP001736
or:
$ mg-toolkit sequence_search -s test.fasta
Project details
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
mg-toolkit-0.2.1.tar.gz
(8.9 kB
view hashes)
Built Distribution
Close
Hashes for mg_toolkit-0.2.1-py3-none-any.whl
Algorithm | Hash digest | |
---|---|---|
SHA256 | c1f17552f83d6576edae38d0d394da0695b35eed3ebfb32f1498a7b7a3f9d1fd |
|
MD5 | 0b77eff6cd51472750549dd244e62115 |
|
BLAKE2b-256 | 7206c9433961652d8ec4a8e0a4e075f7f23be5735a9fff39c990ac8c25ad8f21 |