Skip to main content
Help us improve PyPI by participating in user testing. All experience levels needed!

A minimalist Bioinformatics framework

Project description

a minimalist Bioinformatics framework

For most of my use cases, extensive frameworks such as Biopython or scikit-bio are complete overkill. These frameworks are handling everything as an object (e.g. Sequences) which is certainly helpful in some cases, but often it’s just more straightforward to save the sequences as plain python strings.

This framework aims at providing a bunch of modules for bioinformatics that are lightweight and super-easy to use. At the moment it is limited to some file reading and writing routines, but who knows what comes in the future ;)

Installation

pip install microbio

Contributing

I will extend this project as it serves my projects. If you have useful code to add, feel free to send a pull request.

Project details


Release history Release notifications

This version
History Node

0.1.1

History Node

0.1

Download files

Download the file for your platform. If you're not sure which to choose, learn more about installing packages.

Filename, size & hash SHA256 hash help File type Python version Upload date
microbio-0.1.1.tar.gz (3.8 kB) Copy SHA256 hash SHA256 Source None Apr 27, 2016

Supported by

Elastic Elastic Search Pingdom Pingdom Monitoring Google Google BigQuery Sentry Sentry Error logging CloudAMQP CloudAMQP RabbitMQ AWS AWS Cloud computing Fastly Fastly CDN DigiCert DigiCert EV certificate StatusPage StatusPage Status page