MihkelMagic-Electrical 0.8.0

Automated analysis of superconductor electrical data.

MihkelMagic_Electrical

This is script to automate the analysis of electrical cell data.

Installation

Run the following command: pip install MihkelMagic_Electrical

How to mihkelBayesian

Optimizing hyperparameters

In order to optimize 2 hyperparameters you need to:

from mihkelBayesian import optimize

min_val, min_hyperparameters = optimize.run(evaluateFunction, functionConstants, n_iterations,bounds)

evaluateFunction - a string of the same name as the function you wish to evaluate in functions.py. functionConstans - a list of constants you wish to apply to the evaluateFunction n_iterations - how many measurements of the function the optimizer is allower to make bounds - (1 x 2) shape numpy array that limits the searchspace in the form of [[x1min,x1max],[x2min,x2max]] min_val - the smallest function value min_hyperparameters - hyperparameter pair corresponding to that value.

(Eg. run("rosenbrock",[1,10],300,np.array([[0,10],[-20,40]])))

Choosing the function to evaluate

Open functions.py to see all currently available functions. Each function takes an array XY that is automatically generated by the optimizer and a list of function constants that the function uses. Use one of the pre-existing functions or write your own function that the optimizer will call upon. Custom function can be analytical, machine learning etc.

Testing

Pytest is used to test the code. All tests are located in the 'tests' folder.To run the tests, execute:

pytest

Notes

You can vary the hyperparameters of the optimizer in order to get better results.

More than 500 no_iterations takes long time to compute. Often no more than 300 iterations are needed.

One run with 500 iterations takes about 4 minutes if the function evaluation is instantaneous.