monai-deploy-app-sdk 0.1.0a2

A framework and associated tools to design, verify and analyze performance of MONAI apps

MONAI Deploy Application SDK

MONAI Deploy Application SDK offers a framework and associated tools to design, verify and analyze the performance of AI-driven applications in the healthcare domain.

Features

The codebase is currently under active development.

• Pythonic Framework for app development
• A mechanism to locally run an app via App Runner
• A lightweight app analytics module
• A lightweight 2D/3D visualization module
• A development console
• A set of sample applications
• API documentation & User's Guide

Installation

To install the current release, you can simply run:

pip install monai-deploy-app-sdk  # '--pre' to install a pre-release version.

Getting Started

pip install monai-deploy-app-sdk  # '--pre' to install a pre-release version.

# Clone monai-deploy-app-sdk repository for accessing examples.
git clone https://github.com/Project-MONAI/monai-deploy-app-sdk.git
cd monai-deploy-app-sdk

# Install necessary dependencies for simple_imaging_app
pip install scikit-image

# Execute the app locally
python examples/apps/simple_imaging_app/app.py -i examples/apps/simple_imaging_app/brain_mr_input.jpg -o output

# Package app (creating MAP docker image), using `-l DEBUG` option to see progress.
monai-deploy package examples/apps/simple_imaging_app -t simple_app:latest -l DEBUG

# Run the app with docker image and input file locally
monai-deploy run simple_app:latest examples/apps/simple_imaging_app/brain_mr_input.jpg output

MedNIST demo is available on Colab.

Examples and notebook tutorials are located at Project-MONAI/monai-deploy-app-sdk.

Technical documentation is available at docs.monai.io.

Contributing

For local development, please execute the following command:

./run setup

This will set up the development environment, installing necessary packages.

For guidance on making a contribution to MONAI Deploy Application SDK, see the contributing guidelines.

Community

Join the conversation on Twitter @ProjectMONAI or join our Slack channel.

Links

• Website: https://monai.io
• API documentation: https://docs.monai.io/projects/deploy
• Code: https://github.com/Project-MONAI/monai-deploy-app-sdk
• Project tracker: https://github.com/Project-MONAI/monai-deploy-app-sdk/projects
• Issue tracker: https://github.com/Project-MONAI/monai-deploy-app-sdk/issues
• Wiki: https://github.com/Project-MONAI/monai-deploy-app-sdk/wiki
• Test status: https://github.com/Project-MONAI/monai-deploy-app-sdk/actions
• PyPI package: https://pypi.org/project/monai-deploy-app-sdk