A novel approach to motif identification in proteins
Project description
motif-finder
A novel approach to motif identification in proteins
Important
This code is in BETA and features may change without notice.
Usage
Provide a text query file, which is required. If not using manual motifs, also provide one more motif files using the -m
flag to generate motifs dynamically.
pip install motiffinder
# main program
motiffinder <query file> -m <optional motif file>
# for help
motiffind -h
# for version
motiffinder -v
Or, clone this repository and set up with:
pip install -r requirements.text
python -m motiffinder <query file> -m <optional motif file>
# alternately, use setup.py to get the motiffinder package
python setup.py install
Contributors
Written by Carl Vitzthum and Prof. Andrea Tilden
Project details
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