mousechd-napari 0.0.2a0

A tool for heart segmentation and congenital heart defect detection in mice.

Napari plugin for MouseCHD project

Tool for heart segmentation and congenital heart defect detection in mice.

Installation

From Bundle

(1) Install Napari by following this instruction https://napari.org/stable/tutorials/fundamentals/installation.html#install-as-a-bundled-app

(2) Install mousechd-napari plugin: * Run Napari * Plugins --> Install/Uninstall Plugins ... --> Search for mousechd_napari --> Click on install.

(3) Restart Napari to run the plugin

From code

conda create -n mousechd_napari python=3.9
conda activate mousechd_napari
pip install "napari[all]"
pip install mousechd_napari
napari

How to use

Please find details instruction in folder docs