A tool for heart segmentation and congenital heart defect detection in mice.
Project description
Napari plugin for MouseCHD project
Tool for heart segmentation and congenital heart defect detection in mice.
Installation
From Bundle
(1) Install Napari by following this instruction https://napari.org/stable/tutorials/fundamentals/installation.html#install-as-a-bundled-app
(2) Install mousechd-napari plugin:
* Run Napari
* Plugins --> Install/Uninstall Plugins ... --> Search for mousechd-napari --> Click on install.
(3) Restart Napari to run the plugin
From code
conda create -n mousechd_napari python=3.9
conda activate mousechd_napari
pip install "napari[all]"
pip install mousechd-napari
napari
How to use
Please find details instruction in folder docs
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