mridata 0.2

Python command line interface for downloading and uploading to mridata.org.

mridata-python

This is a python command line interface for downloading and uploading datasets to mridata.org.

Requirements

This package requires requests, tqdm, and boto3. You can install using pip:

pip install requests boto3 tqdm

Installation

The package can be installed via pip:

pip install mridata

To install from source, go to the directory containing setup.py, then run

python setup.py install

Usage

Help message can be viewed through:

mridata -h
mridata [command] -h

Download

To download from mridata.org with a UUID, you can do:

mridata download $UUID

To batch download from a UUID text file (uuids.txt), in which each line is a UUID, you can do:

mridata batch_download $UUIDS_TEXT_FILE

Upload

To upload ISMRMRD, you can do:

mridata upload_ge --username $USERNAME --password $PASSWORD --project_name $PROJECT_NAME --anatomy $ANATOMY --fullysampled True $ismrmrd_file