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Tools and scripts for visualization and comparison of 3d MRI scans (T1, T2 etc)

Project description

mrivis offers:

  • tools for comparison of spatial alignment of two 3D MRI scans (T1, T2, PET etc) using checkerboard plots and other comparison methods
  • classes to develop customizable visualizations of 3D and 4D images
  • additional helper, convenience and utility scripts related to visualization

Full documentation

A sample gallery of different ways to check alignment is shown below:


Full documentation

Executable and interactive demo for the visualization classes:


$ pip install mrivis

If you would like to use the export to GIF from SlicePicker, then install the imageio package as well via pip install imageio

Project details

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