A series of modules that provide easy storage/accesss to Mass Spec related Raw Data/Groupings of Data.
Project description
ms-collect
A series of modules that provide easy storage/accesss to Mass Spec related Raw Data / Groupings of Data.
- Documentation: https://jakuzo.github.io/ms-collect/
- Bug Reports/Feature Requests: https://github.com/jakuzo/ms-collect/issues
- Source Code: https://github.com/jakuzo/ms-collect
- The Why: https://jakuzo.github.io/ms-collect/html/background.html
- Contributing: https://jakuzo.github.io/ms-collect/html/contribute.html
This package is currently in its BETA phase. Your understanding is greatly appreciated.
Installation
pip install ms-collect
Background
In regions of m/z and Retention Time, there exists various signals, features, and collections of data. This package provides:
- Interfaces to entities that can represent these signals and collections.
- Seamless visual utilities for these entities.
- Input/Output utilities for parsing and organizing MS data.
- Various conversion utilities for MS data.
MS-1 3D Plot | MS-1 3D Spectrum |
---|---|
Usage
For usage examples and Api documentation refer to: https://jakuzo.github.io/ms-collect/
Upcoming features
- Visual utilities for the various types of collections.
- Optimizations on resource intensive class methods.
- Better import/export and IO related functionality.
- Converting a collection to a dataframe.
- Better Api doc experience.
- If you would like to see something here we are accepting feature requests! Please submit an issue or ping us!
Project details
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