Project description

msea: Microbe-Set Enrichment Analysis (MSEA) for functional interpretation of sets of microbial organisms

What is it?

msea a Python package implementing the Microbe-Set Enrichment Analysis pipeline, helping microbiologists make sense of collections microbes via external annotations.

Installation

# from PyPI
pip install msea

Dependencies

Tutorials and Documentations

Please refer to examples or read the full documentation.

Development

For local development:

python setup.py develop

To run tests:

python setup.py test

To build documentation with Sphinx:

cd docs && make html

To build distribution:

python setup.py bdist bdist_wheel
# then upload to PyPI
python -m twine upload dist/*

License

BSD 3

Project details

These details have not been verified by PyPI

Project links

Homepage

Release history Release notifications | RSS feed

This version

0.0.2

Jan 18, 2021

0.0.1

Mar 28, 2020

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Download URL: msea-0.0.2-py3-none-any.whl
Upload date: Jan 18, 2021
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Tags: Python 3
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