msgen 0.6.11

Microsoft Genomics Command-line Client

Microsoft Genomics Command-line Client

Installation

msgen is on PyPI and can be installed via:

Linux

sudo apt-get install -y build-essential libssl-dev libffi-dev libpython-dev python-dev python-pip
sudo pip install --upgrade --no-deps msgen
sudo pip install msgen

Windows

pip install --upgrade --no-deps msgen
pip install msgen

msgen is compatible with Python 2.7. If you do not want to install msgen as a system-wide binary and modify system-wide python packages, use the --user flag with pip.

• Base Requirements

  • azure-storage

  • requests

You can install these packages using pip, easy_install or through standard setup.py procedures. These dependencies will be automatically installed if using a package-based install or setup.py. The required versions of these dependent packages can be found in setup.py.

Description

The msgen.py script is the Microsoft Genomics Command-line Client.

Example Usage

msgen -f ~/msgen.config.txt

Note: You’ll need to create a file with your configuration details. In this example it is ~/msgen.config.txt.