A fast and accurate coalescent simulator.
Project description
Msprime is a coalescent simulator and library for processing tree-based genetic data. Msprime can simulate the coalescent with recombination over whole chromosomes for hundreds of thousands of samples, and very efficiently process the resulting genealogies using tskit.
If you use msprime in your work, please cite the PLOS Computational Biology paper. See here for full citation details.
Please see the documentation for further details.
Msprime is very portable, and provides a number of installation options. See here for details.
Release history Release notifications | RSS feed
Download files
Download the file for your platform. If you're not sure which to choose, learn more about installing packages.
Source Distribution
msprime-0.7.3.tar.gz
(476.5 kB
view details)
File details
Details for the file msprime-0.7.3.tar.gz.
File metadata
- Download URL: msprime-0.7.3.tar.gz
- Upload date:
- Size: 476.5 kB
- Tags: Source
- Uploaded using Trusted Publishing? No
- Uploaded via: twine/1.9.1 pkginfo/1.4.1 requests/2.18.4 setuptools/40.8.0 requests-toolbelt/0.8.0 tqdm/4.25.0 CPython/3.4.2
File hashes
| Algorithm | Hash digest | |
|---|---|---|
| SHA256 |
0af8d7ba577b66b150cb6ff03a3aa7d75e6824bf7f8241aad902393997e4a6ab
|
|
| MD5 |
dc31332a2ecf1789f618fd79b39c8d3c
|
|
| BLAKE2b-256 |
d48aaae2bd4dbb5799fa57c9e8435e79739ba5219755dcba4be499cfb94438ff
|
