Read and extract images from a DICOM file using GDCM
A python package that validates, reads, and extracts images from a DICOM file.
This python package requires GDCM with the python wrapper
Quick How To
import mudicom mu = mudicom.load("mudicom/tests/dicoms/ex1.dcm") # returns array of data elements as dicts mu.read() # returns dict of errors and warnings for DICOM mu.validate() # creates image object img = mu.image() # returns numpy array img.numpy() # using Pillow, saves DICOM image img.save_as_pil("ex1.jpg") # using matplotlib, saves DICOM image img.save_as_plt("ex1_2.jpg")
Full documentation is available at https://github.com/neurosnap/mudicom
GDCM with python wrapper
Written by Eric Bower
Special thanks to Mathieu Malaterre (primary developer for GDCM), of whom without this package would not be possible.
Weird permission issues with the egg
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